Changes for compatibility release 0.6.1 (#204)

* Changes for compatibility release 0.6.1

* Added release notes

Author: mdenker

LICENSE.txt

@@ -1,4 +1,4 @@
-Copyright (c) 2014-2018, Elephant authors and contributors
+Copyright (c) 2014-2019, Elephant authors and contributors
 All rights reserved.
 
 Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

README.rst

@@ -19,5 +19,5 @@ Code status
    :target: https://readthedocs.org/projects/elephant/?badge=latest
    :alt: Documentation Status
 
-:copyright: Copyright 2014-2018 by the Elephant team, see AUTHORS.txt.
+:copyright: Copyright 2014-2019 by the Elephant team, see AUTHORS.txt.
 :license: Modified BSD License, see LICENSE.txt for details.

doc/authors.rst

@@ -10,10 +10,12 @@ contribution, and may not be the current affiliation of a contributor.
 
 * Alper Yegenoglu [1]
 * Andrew Davison [2]
+* Björn Müller [1]
 * Detlef Holstein [2]
 * Eilif Muller [3, 4]
 * Emiliano Torre [1]
 * Espen Hagen [1]
+* Jeffrey Gill
 * Jan Gosmann [6, 8]
 * Julia Sprenger [1]
 * Junji Ito [1]

doc/conf.py

@@ -50,7 +50,7 @@
 # General information about the project.
 project = u'Elephant'
 authors = u'Elephant authors and contributors'
-copyright = u'2014-2018, ' + authors
+copyright = u'2014-2019, ' + authors
 
 # The version info for the project you're documenting, acts as replacement for
 # |version| and |release|, also used in various other places throughout the
@@ -59,7 +59,7 @@
 # The short X.Y version.
 version = '0.6'
 # The full version, including alpha/beta/rc tags.
-release = '0.6.0'
+release = '0.6.1'
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.

doc/install.rst

@@ -15,7 +15,7 @@ The following packages are required to use Elephant:
     * numpy_ >= 1.8.2
     * scipy_ >= 0.14.0
     * quantities_ >= 0.10.1
-    * neo_ >= 0.5.0
+    * neo_ >= 0.7.0, <0.8.0
 
 The following packages are optional in order to run certain parts of Elephant:
     * For using the pandas_bridge module: 
@@ -73,8 +73,8 @@ To download and install manually, download the latest package from http://pypi.p
 
 Then::
 
-    $ tar xzf elephant-0.6.0.tar.gz
-    $ cd elephant-0.6.0
+    $ tar xzf elephant-0.6.1.tar.gz
+    $ cd elephant-0.6.1
     $ python setup.py install
     
 or::

doc/release_notes.rst

@@ -2,6 +2,25 @@
 Release Notes
 *************
 
+
+Elephant 0.6.1 release notes
+============================
+April 1st 2019
+
+New functions
+-------------
+* `signal_processing` module
+    * New function to calculate the cross-correlation function for analog signals.
+* `spade` module
+    * Spatio-temporal spike pattern detection now includes the option to assess significance also based on time-lags of patterns, in addition to patterns size and frequency (referred to as 3D pattern spectrum).
+
+Other changes
+-------------
+* This release fixes a number of compatibility issues in relation to API breaking changes in the Neo library.
+* Fixed error in STTC calculation (spike time tiling coefficient)
+* Minor bug fixes
+
+
 Elephant 0.6.0 release notes
 ============================
 October 12th 2018

elephant/__init__.py

@@ -2,7 +2,7 @@
 """
 Elephant is a package for the analysis of neurophysiology data, based on Neo.
 
-:copyright: Copyright 2014-2018 by the Elephant team, see AUTHORS.txt.
+:copyright: Copyright 2014-2019 by the Elephant team, see AUTHORS.txt.
 :license: Modified BSD, see LICENSE.txt for details.
 """
 
@@ -31,4 +31,4 @@
 except ImportError:
     pass
 
-__version__ = "0.6.0"
+__version__ = "0.6.1"

setup.py

@@ -37,7 +37,7 @@
 
 setup(
     name="elephant",
-    version='0.6.0',
+    version='0.6.1',
     packages=['elephant', 'elephant.test'],
     package_data={'elephant': [
         os.path.join('current_source_density_src', 'test_data.mat'),