Skip to content

Commit c21c279

Browse files
refactor test for TSP
1 parent bfa4540 commit c21c279

File tree

1 file changed

+13
-12
lines changed

1 file changed

+13
-12
lines changed

elephant/test/test_total_spiking_probability_edges.py

Lines changed: 13 additions & 12 deletions
Original file line numberDiff line numberDiff line change
@@ -87,25 +87,26 @@ def test_total_spiking_probability_edges(self):
8787
"ER10/new_sim0_100.mat",
8888
"ER15/new_sim0_100.mat",
8989
]
90+
repo_base_path = 'unittest/functional_connectivity/' \
91+
'total_spiking_probability_edges/data/'
9092

9193
for datafile in files:
92-
repo_base_path = 'unittest/functional_connectivity/' \
93-
'total_spiking_probability_edges/data/'
94-
downloaded_dataset_path = download_datasets(repo_base_path +
95-
datafile)
94+
with self.subTest(datafile=datafile):
95+
downloaded_dataset_path = download_datasets(repo_base_path +
96+
datafile)
9697

97-
spiketrains, original_data = load_spike_train_simulated(
98-
downloaded_dataset_path)
98+
spiketrains, original_data = load_spike_train_simulated(
99+
downloaded_dataset_path)
99100

100-
connectivity_matrix, delay_matrix = \
101-
total_spiking_probability_edges(spiketrains)
101+
connectivity_matrix, delay_matrix = \
102+
total_spiking_probability_edges(spiketrains)
102103

103-
# Remove self-connections
104-
np.fill_diagonal(connectivity_matrix, 0)
104+
# Remove self-connections
105+
np.fill_diagonal(connectivity_matrix, 0)
105106

106-
_, _, _, auc = roc_curve(connectivity_matrix, original_data)
107+
_, _, _, auc = roc_curve(connectivity_matrix, original_data)
107108

108-
self.assertGreater(auc, 0.95)
109+
self.assertGreater(auc, 0.95)
109110

110111
# ====== HELPER FUNCTIONS ======
111112

0 commit comments

Comments
 (0)