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[ENH] add trials tutorial notebook #639

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752bb34
add tutorial notebook for trials
Moritz-Alexander-Kern Jul 26, 2024
b4f1f46
add notebook to docs
Moritz-Alexander-Kern Jul 26, 2024
3863008
fix import
Moritz-Alexander-Kern Jul 26, 2024
d6d0042
Change title
Moritz-Alexander-Kern Jul 26, 2024
2529ac4
use UE example data for trials tutorial
Moritz-Alexander-Kern Sep 30, 2024
8da456d
add plotting example for spiketrains in each trial
Moritz-Alexander-Kern Sep 30, 2024
a19c5ca
update ci conda setup
Moritz-Alexander-Kern Sep 30, 2024
7ca89b9
update ci
Moritz-Alexander-Kern Sep 30, 2024
84fe991
rollback changes to conda CI
Moritz-Alexander-Kern Sep 30, 2024
c1b5856
fix plot
Moritz-Alexander-Kern Sep 30, 2024
4127ce4
update use case with UE dataset
Moritz-Alexander-Kern Sep 30, 2024
31dcd19
update heading
Moritz-Alexander-Kern Sep 30, 2024
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12 changes: 12 additions & 0 deletions doc/tutorials.rst
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Expand Up @@ -103,6 +103,17 @@ Additional
.. image:: https://img.shields.io/badge/launch-ebrains-brightgreen
:target: https://lab.ch.ebrains.eu/hub/user-redirect/git-pull?repo=https%3A%2F%2Fgithub.com%2FNeuralEnsemble%2Felephant&urlpath=lab%2Ftree%2Felephant%2Fdoc%2Ftutorials%2Fparallel.ipynb+&branch=master

* Trials

``elephant.trials`` module provides a unified way to handle trial data in neuroscience experiments, supporting both `neo.Block` and list-of-lists structures.

:doc:`View the notebook <../tutorials/trials>` or run interactively:

.. image:: https://mybinder.org/badge.svg
:target: https://mybinder.org/v2/gh/NeuralEnsemble/elephant/master?filepath=doc/tutorials/trials.ipynb
.. image:: https://img.shields.io/badge/launch-ebrains-brightgreen
:target: https://lab.ch.ebrains.eu/hub/user-redirect/git-pull?repo=https%3A%2F%2Fgithub.com%2FNeuralEnsemble%2Felephant&urlpath=lab%2Ftree%2Felephant%2Fdoc%2Ftutorials%2Ftrials.ipynb+&branch=master

..
Index the notebooks in a hidden toctree to avoid sphinx warnings.

Expand All @@ -116,3 +127,4 @@ Additional
tutorials/unitary_event_analysis.ipynb
tutorials/granger_causality.ipynb
tutorials/spade.ipynb
tutorials/trials.ipynb
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