Skip to content

Trial handling: additional functionality and documentation #673

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
wants to merge 42 commits into
base: master
Choose a base branch
from
+1,113 −557
Open

Trial handling: additional functionality and documentation #673

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
42 commits
Select commit Hold shift + click to select a range
f489b1b
Added methods to get all repetitions of a specific analog signal or s…
Jun 18, 2025
d33d4dc
Added docstrings for the new methods
Jun 18, 2025
1c3a1f0
Added IDs to the spiketrains and analog signals in the generated test…
Jun 18, 2025
a92413b
Added unit tests for the trial-by-trial methods
Jun 18, 2025
bbbfcc6
Corrected test names for the TrialsFromBlock test case
Jun 18, 2025
d813a7e
Corrected test names for the TrialsFromBlock test case
Jun 18, 2025
211173b
Fixed error if empty list is passed to TrialsFromLists
Sep 22, 2025
6f8be63
Moved decorator to extract trials as list of SpikeTrainList from util…
Sep 25, 2025
040e72e
Changed argument names to make explicit that trials and other element…
Sep 25, 2025
7e856b1
Comments with short function descriptions rewritten for consistency a…
Sep 25, 2025
a79ebb6
Module docstring rewritten for clarity.
Sep 25, 2025
ab8c9c7
Added section on the accompanying tutorial.
Sep 25, 2025
c506414
Updated copyright
Sep 25, 2025
4b421f7
Organized imports to avoid repeated namespace accesses
Oct 1, 2025
d899800
Updated module docstring
Oct 2, 2025
34e1d8e
Simplified method logic
Oct 2, 2025
d9fade2
Added return type hints to all tests
Oct 2, 2025
443f485
Refactored TestCase class setUp methods for clarity
Oct 2, 2025
25f2ddd
Improved documentation of the decorator test case
Oct 2, 2025
60337b9
Improved documentation of the data generation function
Oct 2, 2025
0cfad26
Implemented base TestCase class with custom assertions for checking N…
Oct 2, 2025
cac295a
Implemented base TestCase class with custom assertions for checking N…
Oct 2, 2025
785f50d
Updated test cases to use base class
Oct 2, 2025
7ecfec2
Refactored decorator test case to use custom assertions
Oct 2, 2025
a729821
Improved test case class documentation
Oct 2, 2025
32d8969
Improved documentation of each test
Oct 2, 2025
ee1dbe2
Improved unit test for TrialsFromBlock description
Oct 2, 2025
cb8bd6d
Refactor and extended unit tests to use custom assertions to perform …
Oct 2, 2025
faf6f23
Split different unit tests
Oct 2, 2025
5a04ecf
Corrected typo
Oct 2, 2025
5e901cc
Changed to use ABC (Python 3 style)
Oct 2, 2025
98ba9f6
Organized imports
Oct 2, 2025
72eb5e2
Added NotImplementedError exceptions to abstract methods
Oct 2, 2025
7d3f9f4
Moved all methods with redundant code to base class
Oct 2, 2025
f8b3fca
Improved documentation of the base Trials class. Default for descript…
Oct 2, 2025
8302c68
Replaced dynamic expected values by explicit values
Oct 2, 2025
38ca75c
Revised docstrings for content and clarity. Added examples.
Oct 8, 2025
e78c683
Merge branch 'master' into enh/trial_by_trial_methods
Nov 6, 2025
cba383d
Fixed IndentationError in doctests
Nov 6, 2025
585162e
Moved tutorial link in docstring to the branch on the trial tutorial
Dec 2, 2025
77cfdb8
Fixed error in assertion that checked the same segment
Dec 2, 2025
6f018b8
Merge branch 'master' into enh/trial_by_trial_methods
kohlerca Dec 2, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
3 changes: 1 addition & 2 deletions elephant/gpfa/gpfa.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -76,8 +76,7 @@
import sklearn

from elephant.gpfa import gpfa_core, gpfa_util
from elephant.trials import Trials
from elephant.utils import trials_to_list_of_spiketrainlist
from elephant.trials import Trials, trials_to_list_of_spiketrainlist


__all__ = ["GPFA"]
Expand Down
Loading
Loading