Skip to content

Commit 1cbd9a8

Browse files
h-mayorquinrly
andauthored
Add micrometer units clarification to electrode table's localization coordinates (#658)
Co-authored-by: Ryan Ly <[email protected]>
1 parent a79b7ec commit 1cbd9a8

File tree

2 files changed

+8
-6
lines changed

2 files changed

+8
-6
lines changed

core/nwb.ecephys.yaml

Lines changed: 6 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -291,17 +291,17 @@ groups:
291291
- name: x
292292
neurodata_type_inc: VectorData
293293
dtype: float32
294-
doc: x coordinate of the channel location in the brain (+x is posterior).
294+
doc: x coordinate of the channel location in the brain (+x is posterior). Units should be specified in microns.
295295
quantity: '?'
296296
- name: y
297297
neurodata_type_inc: VectorData
298298
dtype: float32
299-
doc: y coordinate of the channel location in the brain (+y is inferior).
299+
doc: y coordinate of the channel location in the brain (+y is inferior). Units should be specified in microns.
300300
quantity: '?'
301301
- name: z
302302
neurodata_type_inc: VectorData
303303
dtype: float32
304-
doc: z coordinate of the channel location in the brain (+z is right).
304+
doc: z coordinate of the channel location in the brain (+z is right). Units should be specified in microns.
305305
quantity: '?'
306306
- name: imp
307307
neurodata_type_inc: VectorData
@@ -316,17 +316,17 @@ groups:
316316
- name: rel_x
317317
neurodata_type_inc: VectorData
318318
dtype: float32
319-
doc: x coordinate in electrode group
319+
doc: x coordinate in electrode group. Units should be specified in microns.
320320
quantity: '?'
321321
- name: rel_y
322322
neurodata_type_inc: VectorData
323323
dtype: float32
324-
doc: y coordinate in electrode group
324+
doc: y coordinate in electrode group. Units should be specified in microns.
325325
quantity: '?'
326326
- name: rel_z
327327
neurodata_type_inc: VectorData
328328
dtype: float32
329-
doc: z coordinate in electrode group
329+
doc: z coordinate in electrode group. Units should be specified in microns.
330330
quantity: '?'
331331
- name: reference
332332
neurodata_type_inc: VectorData

docs/format/source/format_release_notes.rst

Lines changed: 2 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -10,6 +10,8 @@ Minor changes
1010
^^^^^^^^^^^^^
1111
- Improved documentation of ``ElectrodeGroup`` to clarify its purpose as a physical grouping of electrodes
1212
that are typically used together for analysis, such as spike sorting. (#659)
13+
- Specified that units for ``ElectrodesTable`` coordinate fields (``x``, ``y``, ``z``, ``rel_x``, ``rel_y``, ``rel_z``)
14+
should be in microns. (#658)
1315

1416

1517
2.9.0 (June 26, 2025)

0 commit comments

Comments
 (0)