pass file object to parent when loading namespaces (#1242)

Co-authored-by: Ryan Ly <[email protected]>

Author: NileGraddis

requirements-min.txt

@@ -1,6 +1,6 @@
 # these minimum requirements specify '==' for testing; setup.py replaces '==' with '>='
 h5py==2.9  # support for setting attrs to lists of utf-8 added in 2.9
-hdmf==1.6.1,<2
+hdmf==1.6.2,<2
 numpy==1.16
 pandas==0.23
 python-dateutil==2.7

requirements.txt

@@ -1,5 +1,5 @@
 h5py==2.10.0
-hdmf==1.6.1
+hdmf==1.6.2
 numpy==1.18.1
 pandas==0.25.3
 python-dateutil==2.8.1

src/pynwb/__init__.py

@@ -227,7 +227,7 @@ def __init__(self, **kwargs):
                 raise ValueError("cannot load namespaces from file when writing to it")
 
             tm = get_type_map()
-            super(NWBHDF5IO, self).load_namespaces(tm, path)
+            super(NWBHDF5IO, self).load_namespaces(tm, path, file=file_obj)
             manager = BuildManager(tm)
 
             # XXX: Leaving this here in case we want to revert to this strategy for