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Add nightly tests for read api

category: proposalproposed enhancements or new featuresproposed enhancements or new features

topic: testingissues related to testingissues related to testing

Status: Open.

#399 In NeurodataWithoutBorders/pynwb;

· dorukozturk opened on Mar 20, 2018

New backend : Exdir

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

Status: Open.

#629 In NeurodataWithoutBorders/pynwb;

· lepmik opened on Sep 25, 2018

Reading Allen Cell Types files

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

Status: Open.

#275 In NeurodataWithoutBorders/pynwb;

· nicain opened on Nov 16, 2017

Check existence of NWBDataInterfaces

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#561 In NeurodataWithoutBorders/pynwb;

· afonsobspinto opened on Jul 14, 2018

Programmatically find all the time series in any NWB file

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#560 In NeurodataWithoutBorders/pynwb;

· afonsobspinto opened on Jul 14, 2018

IntracellularRecordingsTable stimulus/response require metadata even if the stimulus/response is missing

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

help wanted: deep diverequest for community contributions that will involve many parts of the code baserequest for community contributions that will involve many parts of the code base

Status: Open.

#1384 In NeurodataWithoutBorders/pynwb;

· oruebel opened on Jul 21, 2021

Create tutorial on linking data

help wanted: good first issuerequest for community contributions that are good for new contributorsrequest for community contributions that are good for new contributors

priority: mediumnon-critical problem and/or affecting only a small set of NWB usersnon-critical problem and/or affecting only a small set of NWB users

topic: docsissues related to documentationissues related to documentation

Status: Open.

#883 In NeurodataWithoutBorders/pynwb;

· oruebel opened on Apr 12, 2019

[Feature]: README styling

category: proposalproposed enhancements or new featuresproposed enhancements or new features

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

topic: docsissues related to documentationissues related to documentation

Status: Open.

#1665 In NeurodataWithoutBorders/pynwb;

· bendichter opened on Mar 16, 2023

[Documentation]: Create Pyodide example for running PyNWB in the browser

help wanted: good first issuerequest for community contributions that are good for new contributorsrequest for community contributions that are good for new contributors

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

topic: docsissues related to documentationissues related to documentation

Status: Open.

#1577 In NeurodataWithoutBorders/pynwb;

· oruebel opened on Oct 24, 2022

dims check for auto-generated extension classes

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

category: proposalproposed enhancements or new featuresproposed enhancements or new features

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#480 In NeurodataWithoutBorders/pynwb;

· bendichter opened on Apr 23, 2018

Indicate what parameters are optional

help wanted: good first issuerequest for community contributions that are good for new contributorsrequest for community contributions that are good for new contributors

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

topic: docsissues related to documentationissues related to documentation

Status: Open.

#471 In NeurodataWithoutBorders/pynwb;

· bendichter opened on Apr 20, 2018

request: <code>nwbfile.create_electrode_table_region</code> should take type <code>range</code>

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#350 In NeurodataWithoutBorders/pynwb;

· bendichter opened on Feb 1, 2018

[Documentation]: Refactor Configuration Tutorial

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

topic: docsissues related to documentationissues related to documentation

Status: Open.

#1906 In NeurodataWithoutBorders/pynwb;

· mavaylon1 opened on May 22, 2024

[Feature]: Add <code>read_nwb</code> to simplify reading nwbfiles

category: proposalproposed enhancements or new featuresproposed enhancements or new features

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#1974 In NeurodataWithoutBorders/pynwb;

· h-mayorquin opened on Oct 23, 2024

[Feature]: Move NWBZarrIO to PyNWB

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#1977 In NeurodataWithoutBorders/pynwb;

· rly opened on Nov 7, 2024

[Bug]: Cannot add "bounds" attribute to SpatialSeries/data

category: bugerrors in the code or code behaviorerrors in the code or code behavior

priority: mediumnon-critical problem and/or affecting only a small set of NWB usersnon-critical problem and/or affecting only a small set of NWB users

Status: Open.

#1992 In NeurodataWithoutBorders/pynwb;

· rly opened on Nov 15, 2024

[Documentation]: Add examples of metadata for optogenetics and icephys devices

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

topic: docsissues related to documentationissues related to documentation

Status: Open.

#1998 In NeurodataWithoutBorders/pynwb;

· rly opened on Nov 19, 2024

[Documentation]: Activate versions of docs for each previous release

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

priority: mediumnon-critical problem and/or affecting only a small set of NWB usersnon-critical problem and/or affecting only a small set of NWB users

topic: docsissues related to documentationissues related to documentation

Status: Open.

#2014 In NeurodataWithoutBorders/pynwb;

· rly opened on Dec 20, 2024

Use <code>ZoneInfo</code> instead of dateutil to handle time zones.

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

help wanted: good first issuerequest for community contributions that are good for new contributorsrequest for community contributions that are good for new contributors

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#2027 In NeurodataWithoutBorders/pynwb;

· h-mayorquin opened on Jan 28, 2025

[MAINT]: Apply housekeeping updates from HDMF

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

Status: Open.

#2039 In NeurodataWithoutBorders/pynwb;

· rly opened on Feb 18, 2025

[Feature]: Recommend compression and chunking options based on data type and shape

category: enhancementimprovements of code or code behaviorimprovements of code or code behavior

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#2078 In NeurodataWithoutBorders/pynwb;

· rly opened on May 9, 2025

[Bug]: Cannot set optional fields with default values to None

category: bugerrors in the code or code behaviorerrors in the code or code behavior

priority: lowalternative solution already working and/or relevant to only specific user(s)alternative solution already working and/or relevant to only specific user(s)

Status: Open.

#2105 In NeurodataWithoutBorders/pynwb;

· rly opened on Jun 26, 2025

Create default processing modules

Status: Draft (not ready).

NeurodataWithoutBorders/pynwbnumber 1944

#1944 In NeurodataWithoutBorders/pynwb;

· rly opened on Aug 4, 2024