1.2.1

Bug fixes:

• Fix ReadTheDocs build. @rly (#1155)
• Update manifest to fix conda build. @rly (#1156)

1.2.0

Minor enhancements:

• Add new logo to docs. @rly (#1096)
• Add warning when referencing electrode table before it exists. @ajtritt (#1098)
• Refactor internal calls to docval. @rly (#1104)
• Enhance icephys example and documentation. @t-b (#1081)
• Add multi index and time bounds to get_unit_spikes. @bendichter (#1001)
• Improve ophys docstrings. @bendichter (#1126)
• Improve icephys docstrings for gain. @bendichter (#1129)
• Update legal information. @rly (#1131)
• Add support for device description and manufacturer. @rly (#1135)
• Update dependencies and remove explicit six, unittest2 dependency. @rly (#1136, #1138, #1142, #1137, #1154)
• Add object ID tutorial. @rly (#1140)
• Update CI. @rly (#1141)
• Catch critical warnings and throw errors in unit tests. @rly (#1112)
• Create and use testing module, remove builder tests, clean up test code. @rly (#1117)
• Add and test minimum requirements for PyNWB. @rly (#1148)
• Improve docs for get_class. @bendichter (#1149)

Bug fixes:

• Fix versioneer reporting version. @rly (#1100)
• Fix DynamicTable import after move to hdmf.common. @bendichter (#1103)
• Fix handling of unmapped attributes. @rly (#1105)
• Update tests and documentation to reflect new selection behavior of DynamicTable. @oruebel (#1106)
• Fix reference images not being mapped in PlaneSegmentation. @rly (#1109)
• Fix legacy import of ObjectMapper. @rly (#1124)
• Fix extensions documentation typo: 'str' -> 'text'. @bendichter (#1132)
• Revert "PatchClampSeries: Force sweep_number to uint64". @t-b (#1123)
• Fix sphinx code to use latest sphinx. @rly (#1139)

1.1.2

Minor features:

• Use latest HDMF 1.3.3. #1093 (@rly)
• Expose HDMF export_spec utility function for use by extensions. #1092 (@rly)

Bug fixes:

• Fix bug in writing SpikeEventSeries data or timestamps datasets with a DataChunkIterator. #1089 (@bendichter)

1.1.1

PyNWB 1.1.0 does not work with HDMF>=1.3. This release will work with HDMF>=1.3.2.

Minor improvements:

• Support newly added channel-specific conversion factor for ElectricalSeries #1072 (@bendichter)
• Move generic types out of PyNWB into hdmf-common. #1061 (@ajtritt)
• Update documentation to reflect the above changes. #1078 (@rly)
• Add new case to the iterative write tutorial. #1029 (@oruebel)
• Improve CI. #1079 (@rly)
• Pin the current latest version of HDMF to requirements for setup.py. #1083 (@rly)

1.1.0

New features:

• Add object ID to all neurodata types #991 (@ajtritt, @rly)
• Add NWBFile shallow copy method #994 (@ajtritt, @rly)
• Drop official Python 2.7 support #1028 (@rly)
• Add scratch space #1027 #1038 (@ajtritt, @rly)
• Support multiple experimenters #988 #1035 (@ajtritt, @rly)
• Support multiple related publications #1047 (@rly)
• Update schema to 2.1.0 (see release notes in https://nwb-schema.readthedocs.io/en/latest/format_release_notes.html) (@rly, @bendichter, @ajtritt, @oruebel, @t-b)

Minor enhancements:

• Add iterative write check for TimeSeries timestamps #1012 (@bendichter, @oruebel)
• Add functions to convert between pixel mask and image mask for ophys data #766 (@mamelara)
• Add cortical surface extension example #1040 (@bendichter)
• Match API with schema defaults #1033 (@rly)
• Core schema is now a git submodule #1045 (@ajtritt)
• Implement better support for floating point data for Python 3.5 on Windows #1043 (@rly)
• Enhance iterative write tutorial #1029 (@oruebel)
• Allow empty data in DynamicTable with non-empty VectorIndex #887 (@ajtritt)
• Allow OpticalSeries constructor argument 'field_of_view' to be H5Dataset #1063 (@bendichter)
• Clarify documentation for deprecated ImageSeries constructor arg 'bits_per_pixel' #1065 (@rly)
• Adjust code to explicitly map properties after changes made in HDMF 1.2 #1048 #1069 (@rly)
• Improvements to CI, documentation, and GitHub repo structure #1055 (@rly)

1.0.3

New/modified functionality:

• Add MPI functionality to NWBHDF5IO (@bendichter)
• Add option to exclude columns from DynamicTable.to_dataframe() (@NileGraddis)
• Remove ability to add DecompositionSeries to LFP (@bendichter)
• Remove num_samples from TimeSeries (@NileGraddis)
• Automatically detect ragged arrays in from_dataframe (@bendichter)
• Cache the spec by default on write (@rly)
• Improve printing of NWB objects (@rly)
• Change ProcessingModule.add_data_interface() to .add(), ProcessingModule.get_data_interface() to .get(), NWBFile.modules to NWBFile.processing (@bendichter)
• Remove unused SpecFile type (@oruebel)
• Add ability to validate files against the cached spec (@t-b)
• Make CurrentClampSeries/VoltageClampSeries parameters optional (@t-b)
• Update documentation (@t-b, @rly)
• Update copyright/license
• Improve tests and CI
• Update requirements
• See also HDMF changes https://github.com/hdmf-dev/hdmf/releases/tag/1.0.4

Bug fixes:

• Fix dynamictableregion iteration failure after roundtrip (@NileGraddis)
• Fix from_dataframe for children of DynamicTable (@bendichter)
• Fix for modular (cross-file) storage of timeseries timestamps (@NileGraddis)
• Fix bug on loading lists of strings from hdmf 1.0.4 (@rly)
• Fix IO for intervals (@bendichter)
• Fix round trip for Subject.date_of_birth (@bendichter)

Schema changes:

• DecompositionSeries "source_timeseries" link is no longer required (@bendichter)
• Reorder keys (@rly)
• Remove NWBFile "specifications" group (@oruebel)
• CorrectedImageStack and ImagingRetinotopy inherits from NWBDataInterface instead of NWBContainer (@rly)
• Fix typo in unit of resistance_comp_prediction/correction (@t-b)
• Add option for third dimension for Units "waveforms" dataset to represent different electrodes (@bendichter)
• Update NWBFile.nwb_version to 2.0.2

1.0.2

pynwb 1.0.2

1.0.1

pynwb 1.0.1

1.0.0

pynwb 1.0.0

0.6.2

pynwb 0.6.2