Merge pull request #25 from kjetilaas/updated_fates_param_for_NorESM3b1

Update default fates cdl parameter file to NorESM3b1 version

Author: maritsandstad

parameter_files/fates_params_default.cdl

@@ -1,4 +1,4 @@
-netcdf fates_params_default {
+netcdf fates_params_api.40.0.0_14pft_c250627_noresm_v21 {
 dimensions:
 	fates_NCWD = 4 ;
 	fates_history_age_bins = 7 ;
@@ -679,13 +679,13 @@ variables:
 		fates_woody:units = "logical flag" ;
 		fates_woody:long_name = "Binary woody lifeform flag" ;
 	double fates_voc_pftindex(fates_pft) ;
-	       fates_voc_pftindex: units = "Integer PFT index" ;
-	       fates_voc_pftindex: long_name = "integer index for MEGAN PFT definitions" ;
+		fates_voc_pftindex:units = "Integer PFT index" ;
+		fates_voc_pftindex:long_name = "integer index for MEGAN PFT definitions" ;
 	double fates_hlm_pft_map(fates_hlm_pftno, fates_pft) ;
 		fates_hlm_pft_map:units = "area fraction" ;
 		fates_hlm_pft_map:long_name = "In fixed biogeog mode, fraction of HLM area associated with each FATES PFT" ;
-        double fates_wesley_pft_index_fordrydep(fates_pft) ; 
-	        fates_wesley_pft_index_fordrydep:units = "integer index";
+	double fates_wesley_pft_index_fordrydep(fates_pft) ;
+		fates_wesley_pft_index_fordrydep:units = "integer index" ;
 		fates_wesley_pft_index_fordrydep:long_name = "index to map from fates pfts into the wesley pft space used to determing dry deposition veolcity." ;
 	double fates_fire_FBD(fates_litterclass) ;
 		fates_fire_FBD:units = "kg Biomass/m3" ;
@@ -923,7 +923,9 @@ variables:
 		fates_vai_width_increase_factor:long_name = "factor by which each leaf+stem scattering element increases in VAI width (1 = uniform spacing)" ;
 
 // global attributes:
-		:history = "This file was generated by BatchPatchParams.py:\nCDL Base File = fates_params_default.cdl\nXML patch file = archive/api36.1.0_100224_pr1255-2.xml" ;
+		:history = "This file was generated by BatchPatchParams.py:\n",
+			"CDL Base File = fates_params_default.cdl\n",
+			"XML patch file = archive/api36.1.0_100224_pr1255-2.xml" ;
 data:
 
  fates_history_ageclass_bin_edges = 0, 1, 2, 5, 10, 20, 50 ;
@@ -990,7 +992,7 @@ data:
   3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3,
   4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4 ;
 
- fates_alloc_storage_cushion = 1.2, 2.4, 2.4, 1.2, 2.4, 2.4, 2.4, 2.4, 2.4, 
+ fates_alloc_storage_cushion = 1.2, 2.4, 2.4, 2.4, 2.4, 2.4, 2.4, 2.4, 2.4, 
     2.4, 2.4, 2.4, 2.4, 2.4 ;
 
  fates_alloc_store_priority_frac = 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 
@@ -1069,7 +1071,7 @@ data:
 
  fates_allom_hmode = 5, 5, 5, 5, 5, 5, 1, 1, 1, 1, 1, 3, 3, 3 ;
 
- fates_allom_l2fr = 1, 0.75, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 4, 1.41 ;
+ fates_allom_l2fr = 1, 0.75, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 3, 1.41 ;
 
  fates_allom_la_per_sa_int = 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 
     0.8, 0.8, 0.8, 0.8, 0.8 ;
@@ -1211,8 +1213,8 @@ data:
  fates_frag_seed_decay_rate = 0.51, 0.51, 0.51, 0.51, 0.51, 0.51, 0.51, 0.51, 
     0.51, 0.74, 0.46, 0.35, 0.51, 0.51 ;
 
- fates_grperc = 0.11, 0.11, 0.11, 0.11, 0.11, 0.11, 0.11, 0.11, 0.11, 0.12, 
-    0.11, 0.16, 0.11, 0.11 ;
+ fates_grperc = 0.35, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 0.25, 
+    0.25, 0.25, 0.25, 0.25 ;
 
  fates_hydro_avuln_gs = 2.5, 2.5, 2.5, 2.5, 2.5, 2.5, 2.5, 2.5, 2.5, 2.5, 
     2.5, 2.5, 2.5, 2.5 ;
@@ -1369,23 +1371,24 @@ data:
  fates_leaf_slamax = 0.03, 0.03, 0.025, 0.03, 0.05, 0.05, 0.012, 0.03, 0.03, 
     0.012, 0.032, 0.05, 0.05, 0.05 ;
 
- fates_leaf_slatop = 0.024, 0.01, 0.021, 0.024, 0.02, 0.03, 0.012, 0.03, 
+ fates_leaf_slatop = 0.024, 0.01, 0.026, 0.024, 0.02, 0.03, 0.012, 0.03, 
     0.03, 0.01, 0.032, 0.027, 0.04, 0.04 ;
 
  fates_leaf_stomatal_btran_model = 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 ;
 
- fates_leaf_stomatal_intercept = 50000, 21529.33, 13370.411, 26779.681, 
+ fates_leaf_stomatal_intercept = 16033.365, 21529.33, 13370.411, 26779.681, 
     12869.022, 6205.777, 10000, 10000, 3750.669, 10000, 10000, 1624.209, 
     313709.616, 439459.319 ;
 
- fates_leaf_stomatal_slope_ballberry = 12, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8 ;
+ fates_leaf_stomatal_slope_ballberry = 10, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 8, 
+    8, 8 ;
 
  fates_leaf_stomatal_slope_medlyn = 2.038, 2.482, 2.571, 4.038, 3.459, 4.353, 
     4.7, 4.7, 2.503, 4.7, 4.7, 2.423, 5.799, 0.967 ;
 
  fates_leaf_vcmax25top =
-  53.142, 40, 20.443, 20.252, 38.393, 34.363, 62, 54, 43.712, 38, 54, 39.168, 
-    64, 17.955 ;
+  53.142, 24, 40, 40, 38.393, 34.363, 62, 54, 43.712, 38, 54, 39.168, 64, 
+    17.955 ;
 
  fates_leaf_vcmaxha = 65330, 65330, 65330, 65330, 65330, 65330, 65330, 65330, 
     65330, 65330, 65330, 65330, 65330, 65330 ;
@@ -1433,12 +1436,13 @@ data:
  fates_mort_hf_flc_threshold = 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 
     0.5, 0.5, 0.5, 0.5, 0.5 ;
 
- fates_mort_hf_sm_threshold = 1e-06, 1e-06, 1e-06, 1e-06, 1e-06, 1e-06, 
-    1e-06, 1e-06, 1e-06, 1e-06, 1e-06, 1e-06, 1e-06, 1e-06 ;
+ fates_mort_hf_sm_threshold = 1e-05, 1e-05, 1e-05, 1e-05, 1e-05, 1e-05, 
+    1e-05, 1e-05, 1e-05, 1e-05, 1e-05, 1e-05, 1e-05, 1e-05 ;
 
  fates_mort_ip_age_senescence = _, _, _, _, _, _, _, _, _, _, _, _, _, _ ;
 
- fates_mort_ip_size_senescence = _, _, _, _, _, _, _, _, _, _, _, _, _, _ ;
+ fates_mort_ip_size_senescence = 170, 150, 150, 150, 150, 150, 150, _, _, _, 
+    _, _, _, _ ;
 
  fates_mort_prescribed_canopy = 0.0194, 0.0194, 0.0194, 0.0194, 0.0194, 
     0.0194, 0.0194, 0.0194, 0.0194, 0.0194, 0.0194, 0.0194, 0.0194, 0.0194 ;
@@ -1448,9 +1452,10 @@ data:
 
  fates_mort_r_age_senescence = _, _, _, _, _, _, _, _, _, _, _, _, _, _ ;
 
- fates_mort_r_size_senescence = _, _, _, _, _, _, _, _, _, _, _, _, _, _ ;
+ fates_mort_r_size_senescence = 0.045, 0.045, 0.045, 0.045, 0.045, 0.045, 
+    0.045, 0.045, 0.045, 0.045, 0.045, 0.045, 0.045, 0.045 ;
 
- fates_mort_scalar_coldstress = 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3.5, 2.3, 3, 3 ;
+ fates_mort_scalar_coldstress = 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 ;
 
  fates_mort_scalar_cstarvation = 0.6, 0.6, 0.6, 0.6, 0.6, 0.6, 0.6, 0.6, 0.6, 
     0.6, 0.57, 0.6, 0.6, 0.6 ;
@@ -1537,19 +1542,19 @@ data:
     0.02, 0.02, 0.02, 0.02, 0.02, 0.02, 0.02 ;
 
  fates_recruit_seed_alloc = 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 
-    0.07, 0.1, 0, 0, 0 ;
+    0.07, 0.1, 0.1, 0.1, 0.1 ;
 
  fates_recruit_seed_alloc_mature = 0, 0, 0, 0, 0, 0, 0.9, 0.9, 0.9, 0.9, 0.9, 
-    0.25, 0.25, 0.2 ;
+    0.25, 0.25, 0.9 ;
 
  fates_recruit_seed_dbh_repro_threshold = 90, 80, 80, 80, 90, 80, 3, 3, 2, 
-    2.4, 1.9, 3, 3, 3 ;
+    2.4, 1.9, 3, 3, 30 ;
 
  fates_recruit_seed_germination_rate = 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 
     0.5, 0.5, 0.4, 0.49, 0.29, 0.5, 0.5 ;
 
- fates_recruit_seed_supplement = 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 
-    0.1, 0.1, 0.1, 0.1, 0.1 ;
+ fates_recruit_seed_supplement = 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.001, 
+    0.001 ;
 
  fates_seed_dispersal_fraction = _, _, _, _, _, _, _, _, _, _, _, _, _, _ ;
 
@@ -1659,13 +1664,13 @@ data:
  fates_turb_leaf_diameter = 0.04, 0.04, 0.04, 0.04, 0.04, 0.04, 0.04, 0.04, 
     0.04, 0.04, 0.04, 0.04, 0.04, 0.04 ;
 
- fates_turb_z0mr = 0.075, 0.055, 0.055, 0.075, 0.055, 0.055, 0.12, 0.12,
+ fates_turb_z0mr = 0.075, 0.055, 0.055, 0.075, 0.055, 0.055, 0.12, 0.12, 
     0.12, 0.12, 0.12, 0.12, 0.12, 0.12 ;
 
  fates_turnover_branch = 150, 150, 150, 150, 150, 150, 150, 150, 150, 150, 
     150, 0, 0, 0 ;
 
- fates_turnover_fnrt = 1, 2, 1.5, 1.5, 1, 1, 1.5, 1, 1, 1.5, 1, 1, 0.5, 0.5 ;
+ fates_turnover_fnrt = 1, 2, 2, 1.5, 1, 1, 1.5, 1, 1, 1.5, 1, 1, 0.5, 0.5 ;
 
  fates_turnover_leaf_canopy =
   1.5, 4, 1, 1.5, 1, 1, 1.5, 1, 1, 1.5, 1, 0.5, 0.15, 0.5 ;
@@ -1698,7 +1703,7 @@ data:
   0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0,
   0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1 ;
 
- fates_wesley_pft_index_fordrydep =  4, 5, 5, 4, 4, 4, 11, 11, 11 ,3, 3, 3, 3, 3;
+ fates_wesley_pft_index_fordrydep = 4, 5, 5, 4, 4, 4, 11, 11, 11, 3, 3, 3, 3, 3 ;
 
  fates_fire_FBD = 15.4, 16.8, 19.6, 999, 4, 4 ;
 
@@ -1720,9 +1725,9 @@ data:
 
  fates_frag_cwd_frac = 0.045, 0.075, 0.21, 0.67 ;
 
- fates_landuse_crop_lu_pft_vector = -999, -999, -999, -999, 11 ;
+ fates_landuse_crop_lu_pft_vector = -999, -999, -999, -999, 13 ;
 
- fates_landuse_grazing_rate = 0, 0, 0, 0, 0 ;
+ fates_landuse_grazing_rate = 0, 0, 0.01, 0.02, 0 ;
 
  fates_max_nocomp_pfts_by_landuse = 4, 4, 1, 1, 1 ;
 
@@ -1788,23 +1793,23 @@ data:
 
  fates_landuse_grazing_phosphorus_use_eff = 0.5 ;
 
- fates_landuse_logging_coll_under_frac = 0. ;
+ fates_landuse_logging_coll_under_frac = 0 ;
 
- fates_landuse_logging_collateral_frac = 0. ;
+ fates_landuse_logging_collateral_frac = 0 ;
 
  fates_landuse_logging_dbhmax = _ ;
 
  fates_landuse_logging_dbhmax_infra = 0 ;
 
  fates_landuse_logging_dbhmin = 0 ;
 
- fates_landuse_logging_direct_frac = 1. ;
+ fates_landuse_logging_direct_frac = 1 ;
 
  fates_landuse_logging_event_code = -30 ;
 
  fates_landuse_logging_export_frac = 0.8 ;
 
- fates_landuse_logging_mechanical_frac = 0. ;
+ fates_landuse_logging_mechanical_frac = 0 ;
 
  fates_leaf_photo_temp_acclim_thome_time = 30 ;
 
@@ -1854,5 +1859,5 @@ data:
 
  fates_vai_top_bin_width = 0.5 ;
 
- fates_vai_width_increase_factor = 1.1 ;
+ fates_vai_width_increase_factor = 1.25 ;
 }