PLUGINS-313 Adding stack trace visualization to xsync configuration dashboard

Author: ian-xnatworks

src/main/java/org/nrg/xnat/xsync/anonymize/AbstractExportAnonymizer.java

@@ -11,6 +11,7 @@
 import java.util.List;
 import java.util.concurrent.Callable;
 
+import lombok.Setter;
 import org.nrg.xnat.archive.ArchivingException;
 import org.nrg.xnat.helpers.merge.MergeUtils;
 import org.slf4j.Logger;
@@ -23,6 +24,7 @@
 import org.nrg.xdat.XDAT;
 
 
+@Setter
 public abstract class AbstractExportAnonymizer implements Callable<List<AnonymizationResult>> {
 	public static final Logger logger = LoggerFactory.getLogger(AbstractExportAnonymizer.class);
 
@@ -32,16 +34,12 @@ public abstract class AbstractExportAnonymizer implements Callable<List<Anonymiz
 
 	abstract String getLabel();
 
-	public void setNext(AbstractExportAnonymizer a) {
-		this.next = a;
-	}
-
-	public List<AnonymizationResult> anonymize(List<File> files) throws MizerException {
+    public List<AnonymizationResult> anonymize(List<File> files) throws MizerException {
 
 		String scriptContent = this.getScript();
 		if (StringUtils.isNotEmpty(scriptContent)) {
 			final MizerService service = XDAT.getContextService().getBeanSafely(MizerService.class);
-			final List<AnonymizationResult> anonResult = service.anonymize(files, this.getProjectName(), this.getSubject(), this.getLabel(), new Long(0), scriptContent, true, false);
+			final List<AnonymizationResult> anonResult = service.anonymize(files, this.getProjectName(), this.getSubject(), this.getLabel(), 0L, scriptContent, true, false);
 
 			try {
 				MergeUtils.deleteRejectedFiles(logger, anonResult, getProjectName());
@@ -62,38 +60,24 @@ public List<AnonymizationResult> anonymize(List<File> files) throws MizerExcepti
 			// this project does not have an anon script
 			//Just copy the files
 		}
-		
 	}
 
-
 	/**
 	 * Get the appropriate edit script.
-	 * 
-	 * @return
 	 */
 	abstract String getScript();
 
-	/**
-	 * Check if editing is enabled.
-	 * 
-	 * @return
-	 */
 	abstract boolean isEnabled();
 
 	/**
 	 * Sometimes the session passed in isn't associated with a project, for
 	 * instance if the session is in the prearchive so subclasses must specify
 	 * how to get the project name.
-	 * 
-	 * @return
 	 */
 	abstract String getProjectName();
 
 	/**
 	 * Get the list of files that need to be anonymized.
-	 * 
-	 * @return
-	 * @throws IOException
 	 */
 	abstract List<File> getFilesToAnonymize() throws IOException;
 

src/main/java/org/nrg/xsync/local/ResourceSyncManager.java

@@ -81,7 +81,7 @@ public void syncResources(XnatSubjectdataI remoteSubject, Map<String, List<XnatA
         List<XnatAbstractresourceI> deletedResources = resourcesToBeSynced.get(QueryResultUtil.DELETE_STATUS);
         List<XnatAbstractresourceI> updatedResources = resourcesToBeSynced.get(QueryResultUtil.ACTIVE_STATUS);
         List<XnatAbstractresourceI> newResources = resourcesToBeSynced.get(QueryResultUtil.NEW_STATUS);
-        if (deletedResources != null && deletedResources.size() > 0) {
+        if (deletedResources != null && !deletedResources.isEmpty()) {
             //Remove each of these resources from the Remote site
             if (syncAllStates) {
                 for (XnatAbstractresourceI resource:deletedResources) {
@@ -245,7 +245,7 @@ private void pushResourceInParts(XnatSubjectdataI remoteSubject, XnatAbstractres
                 if (resource.getFileSize() != null) {
                     resourceSyncItem.setFileSize(resource.getFileSize());
                 } else {
-                    resourceSyncItem.setFileSize(new Long(0));
+                    resourceSyncItem.setFileSize(0L);
                 }
                 resourceSyncItem.setSyncStatus(XsyncUtils.SYNC_STATUS_FAILED);
                 resourceSyncItem.setMessage("Subject " + localSubject.getLabel() + " resource " + rLabel + " could not be updated. " + responses.toString() );
@@ -262,7 +262,7 @@ private void pushResourceInParts(XnatSubjectdataI remoteSubject, XnatAbstractres
             if (resource.getFileSize() != null) {
                 resourceSyncItem.setFileSize(resource.getFileSize());
             } else {
-                resourceSyncItem.setFileSize(new Long(0));
+                resourceSyncItem.setFileSize(0L);
             }
             resourceSyncItem.setSyncStatus(XsyncUtils.SYNC_STATUS_FAILED);
             resourceSyncItem.setMessage("Subject " + localSubject.getLabel() + " resource " + rLabel + " could not be updated. " + e.getMessage() );