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Contexts #6

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9fae2a9
Update for new computation environment routines.
chrispbradley Apr 10, 2018
39fbf23
Merge branch 'develop' of https://github.com/OpenCMISS-Examples/cellm…
chrispbradley Apr 11, 2018
b3d92e3
Fixes for contexts.
chrispbradley Apr 27, 2018
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17 changes: 11 additions & 6 deletions src/python/cellml_growth_law.py
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Original file line number Diff line number Diff line change
Expand Up @@ -88,28 +88,33 @@

InterpolationType = 1

worldRegion = iron.Region()
iron.Context.WorldRegionGet(worldRegion)

iron.DiagnosticsSetOn(iron.DiagnosticTypes.FROM,[1,2,3,4,5],"Diagnostics",["FiniteElasticity_FiniteElementResidualEvaluate"])

# Get the number of computational nodes and this computational node number
numberOfComputationalNodes = iron.ComputationalNumberOfNodesGet()
computationalNodeNumber = iron.ComputationalNodeNumberGet()
computationEnvironment = iron.ComputationEnvironment()
iron.Context.ComputationEnvironmentGet(computationEnvironment)
numberOfComputationalNodes = computationEnvironment.NumberOfWorldNodesGet()
computationalNodeNumber = computationEnvironment.WorldNodeNumberGet()

# Create a 3D rectangular cartesian coordinate system
coordinateSystem = iron.CoordinateSystem()
coordinateSystem.CreateStart(coordinateSystemUserNumber)
coordinateSystem.CreateStart(coordinateSystemUserNumber,iron.Context)
coordinateSystem.DimensionSet(3)
coordinateSystem.CreateFinish()

# Create a region and assign the coordinate system to the region
region = iron.Region()
region.CreateStart(regionUserNumber,iron.WorldRegion)
region.CreateStart(regionUserNumber,worldRegion)
region.LabelSet("Region")
region.coordinateSystem = coordinateSystem
region.CreateFinish()

# Define basis
basis = iron.Basis()
basis.CreateStart(basisUserNumber)
basis.CreateStart(basisUserNumber,iron.Context)
if InterpolationType in (1,2,3,4):
basis.type = iron.BasisTypes.LAGRANGE_HERMITE_TP
basis.numberOfXi = 3
Expand Down Expand Up @@ -391,7 +396,7 @@
problemSpecification = [iron.ProblemClasses.ELASTICITY,
iron.ProblemTypes.FINITE_ELASTICITY,
iron.ProblemSubtypes.FINITE_ELASTICITY_WITH_GROWTH_CELLML]
problem.CreateStart(problemUserNumber,problemSpecification)
problem.CreateStart(problemUserNumber,iron.Context,problemSpecification)
problem.CreateFinish()

# Create control loops
Expand Down