OpenFreeEnergy
diff --git a/‎cookbook/assets/mst_network_tyk2.json‎
Lines changed: 1 addition & 0 deletions b/‎cookbook/assets/mst_network_tyk2.json‎
Lines changed: 1 addition & 0 deletions
diff --git a/‎cookbook/repairing_broken_networks.ipynb‎
Lines changed: 2 additions & 2 deletions b/‎cookbook/repairing_broken_networks.ipynb‎
Lines changed: 2 additions & 2 deletions
@@ -101,7 +101,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": 13,
    "id": "8a702d3c",
    "metadata": {},
    "outputs": [
@@ -114,7 +114,7 @@
     }
    ],
    "source": [
-    "planned = LigandNetwork.from_json(\"ligand_network.json\")\n",
+    "planned = LigandNetwork.from_json(\"assets/mst_network_tyk2.json\")\n",
     "\n",
     "print(\"planned connected:\", planned.is_connected(), \" edges:\", len(planned.edges))"
    ]
Original file line number	Diff line number	Diff line change
`@@ -101,7 +101,7 @@`
`101`	`101`	`},`
`102`	`102`	`{`
`103`	`103`	`"cell_type": "code",`
`104`		`- "execution_count": 3,`
	`104`	`+ "execution_count": 13,`
`105`	`105`	`"id": "8a702d3c",`
`106`	`106`	`"metadata": {},`
`107`	`107`	`"outputs": [`
`@@ -114,7 +114,7 @@`
`114`	`114`	`}`
`115`	`115`	`],`
`116`	`116`	`"source": [`
`117`		`- "planned = LigandNetwork.from_json(\"ligand_network.json\")\n",`
	`117`	`+ "planned = LigandNetwork.from_json(\"assets/mst_network_tyk2.json\")\n",`
`118`	`118`	`"\n",`
`119`	`119`	`"print(\"planned connected:\", planned.is_connected(), \" edges:\", len(planned.edges))"`
`120`	`120`	`]`