Merge branch 'edge' into identify_labware_defs

Author: SyntaxColoring

.codecov.yml

@@ -1,27 +1,55 @@
+version: 2.0
+
+coverage:
+  status:
+    project:
+      default:
+        target: auto
+        threshold: '10'
+    patch:
+      default:
+        target: auto
+        threshold: 0
+
+comment:
+  layout: 'reach, diff, flags, files'
+
 ignore:
-  - '**/node_modules'
-  - 'webpack-config'
-  - 'hardware-testing'
-  - '**/*.md'
-  - '**/*.yaml'
+  - 'webpack-config/**'
+  - 'hardware-testing/**'
+  - 'abr-testing/**'
+  - 'test-data-generation/**'
+  - 'performance-metrics/**'
+  - 'package-testing/**'
+  - 'opentrons-ai-server/**'
+  - 'opentrons-ai-client/**'
+  - 'g-code-testing/**'
+  - 'api-client/**'
+  - 'analyses-snapshot-testing/**'
+  - '.storybook/**'
+  - 'react-api-client/**'
+  - 'scripts/**'
+  - '.github/**'
+  - '**/build/**'
+  - '**/dist/**'
+  - '**/node_modules/**'
+  - '**/{test,tests,__tests__,__mocks__,mocks}/**'
+  - '**/*.{md,yaml,yml,json,rst}'
   - '**/Makefile'
-  - '**/*.in'
-  - '**/*.json'
-  - '**/*.config.js'
+  - '**/*.{in,ini,lock,toml,cfg}'
+  - '**/setup.py'
+  - '**/requirements.txt'
+  - '**/.flake8'
+  - '**/.coveragerc'
+  - '**/.prettierrc.js'
+  - '**/.eslintrc.js'
+  - '**/Pipfile'
+  - '**/Dockerfile*'
+  - '**/*.{config.js,config.ts}'
   - '**/*.mk'
   - '**/*.stories.tsx'
-
-comment:
-  # add flags to `layout` configuration to show up in the PR comment
-  layout: 'reach, diff, flags, files'
+  - '**/*.{mjs,css,cjs,mts}'
 
 flag_management:
   default_rules:
     carryforward: true
-
-coverage:
-  status:
-    project:
-      default:
-        target: auto
-        threshold: 10

.github/workflows/api-test-lint-deploy.yaml

@@ -49,7 +49,7 @@ jobs:
   lint:
     name: 'opentrons package linting'
     timeout-minutes: 10
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
         with:
@@ -183,7 +183,7 @@ jobs:
   deploy:
     name: 'deploy opentrons package'
     needs: [test]
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     if: github.event_name == 'push'
     steps:
       - uses: 'actions/checkout@v4'

.github/workflows/app-test-build-deploy.yaml

@@ -52,7 +52,7 @@ env:
 jobs:
   js-unit-test:
     # unit tests for the app's view layer (not the node layer)
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     name: 'opentrons app frontend unit tests'
     timeout-minutes: 60
     steps:
@@ -386,7 +386,7 @@ jobs:
 
   deploy-release-app:
     name: 'Deploy built app artifacts to S3'
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     needs:
       ['js-unit-test', 'backend-unit-test', 'build-app', 'determine-build-type']
     if: contains(fromJSON(needs.determine-build-type.outputs.variants), 'release') || contains(fromJSON(needs.determine-build-type.outputs.variants), 'internal-release')

.github/workflows/components-test-build-deploy.yaml

@@ -41,7 +41,7 @@ jobs:
   js-unit-test:
     name: 'components unit tests'
     timeout-minutes: 30
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
       - uses: 'actions/setup-node@v4'
@@ -75,7 +75,7 @@ jobs:
 
   build-components-storybook:
     name: 'build components artifact'
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     if: github.event_name != 'pull_request'
     needs: ['js-unit-test']
     steps:
@@ -135,7 +135,7 @@ jobs:
 
   deploy-components:
     name: 'deploy components storybook artifact to S3'
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     needs:
       ['js-unit-test', 'build-components-storybook', 'determine-build-type']
     if: needs.determine-build-type.outputs.type != 'none'

.github/workflows/docs-build.yaml

@@ -38,7 +38,7 @@ defaults:
 jobs:
   build:
     name: opentrons documentation build
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
         with:

.github/workflows/g-code-confirm-tests.yaml

@@ -33,7 +33,7 @@ jobs:
       matrix:
         command: ['2-modules', 'swift-smoke', 'swift-turbo', 'omega', 'fast']
     name: 'Confirm G-Code (${{ matrix.command }})'
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
         with:

.github/workflows/g-code-testing-lint-test.yaml

@@ -40,7 +40,7 @@ defaults:
 jobs:
   lint-test:
     name: 'g-code-testing package linting and tests'
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
         with:

.github/workflows/http-docs-build.yaml

@@ -38,7 +38,7 @@ defaults:
 jobs:
   build:
     name: HTTP API reference build
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
         with:

.github/workflows/js-check.yaml

@@ -39,7 +39,7 @@ env:
 jobs:
   checks:
     name: 'js checks'
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     timeout-minutes: 20
     steps:
       - uses: 'actions/checkout@v4'

.github/workflows/ll-test-build-deploy.yaml

@@ -40,7 +40,7 @@ jobs:
   js-unit-test:
     name: 'labware library unit tests'
     timeout-minutes: 20
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
       - uses: 'actions/setup-node@v4'
@@ -83,7 +83,7 @@ jobs:
     name: 'labware library e2e tests'
     needs: ['js-unit-test']
     timeout-minutes: 30
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
       # https://github.com/actions/checkout/issues/290
@@ -123,7 +123,7 @@ jobs:
     name: 'build labware library artifact'
     needs: ['js-unit-test']
     timeout-minutes: 30
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     if: github.event_name != 'pull_request'
     steps:
       - uses: 'actions/checkout@v4'
@@ -170,7 +170,7 @@ jobs:
           path: labware-library/dist
   deploy-ll:
     name: 'deploy LL artifact to S3'
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     needs: ['js-unit-test', 'e2e-test', 'build-ll']
     if: github.event_name != 'pull_request'
     steps:

.github/workflows/opentrons-ai-client-staging-continuous-deploy.yaml

@@ -16,7 +16,7 @@ env:
 
 jobs:
   js-unit-test:
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     permissions:
       id-token: write
       contents: read
@@ -53,8 +53,8 @@ jobs:
           make setup-js
       - name: 'build'
         env:
-            # inject dev id since this is for staging
-            OT_AI_CLIENT_MIXPANEL_ID: ${{ secrets.OT_AI_CLIENT_MIXPANEL_DEV_ID }}
+          # inject dev id since this is for staging
+          OT_AI_CLIENT_MIXPANEL_ID: ${{ secrets.OT_AI_CLIENT_MIXPANEL_DEV_ID }}
         run: |
           make -C opentrons-ai-client build-staging
       - name: Configure AWS Credentials

.github/workflows/opentrons-ai-client-test.yaml

@@ -35,7 +35,7 @@ env:
 
 jobs:
   js-unit-test:
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     name: 'opentrons ai frontend unit tests'
     timeout-minutes: 60
     steps:

.github/workflows/opentrons-ai-production-deploy.yaml

@@ -16,7 +16,7 @@ jobs:
     concurrency:
       group: ${{ github.workflow }}-ai-client@
       cancel-in-progress: true
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     permissions:
       id-token: write
       contents: read
@@ -53,7 +53,7 @@ jobs:
           make setup-js
       - name: 'build'
         env:
-              OT_AI_CLIENT_MIXPANEL_ID: ${{ secrets.OT_AI_CLIENT_MIXPANEL_ID }}
+          OT_AI_CLIENT_MIXPANEL_ID: ${{ secrets.OT_AI_CLIENT_MIXPANEL_ID }}
         run: |
           make -C opentrons-ai-client build-production
       - name: Configure AWS Credentials

.github/workflows/react-api-client-test.yaml

@@ -34,7 +34,7 @@ jobs:
   js-unit-test:
     name: 'api-client and react-api-client unit tests'
     timeout-minutes: 30
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
       - uses: 'actions/setup-node@v4'

.github/workflows/robot-server-lint-test.yaml

@@ -51,7 +51,7 @@ jobs:
   lint-test:
     name: 'robot server package linting and tests'
     timeout-minutes: 40
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     strategy:
       matrix:
         with-ot-hardware: ['true', 'false']

.github/workflows/server-utils-lint-test.yaml

@@ -39,7 +39,7 @@ jobs:
   lint:
     name: 'server-utils linting'
     timeout-minutes: 10
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
         with:
@@ -60,7 +60,7 @@ jobs:
     name: 'server-utils package tests'
     timeout-minutes: 10
     needs: [lint]
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
         with:

.github/workflows/shared-data-test-lint-deploy.yaml

@@ -44,7 +44,7 @@ jobs:
   python-lint:
     name: 'shared-data package python lint'
     timeout-minutes: 10
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     steps:
       - uses: 'actions/checkout@v4'
         with:
@@ -112,7 +112,7 @@ jobs:
 
   js-test:
     name: 'shared-data JS tests'
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     timeout-minutes: 30
     steps:
       - uses: 'actions/checkout@v4'
@@ -149,7 +149,7 @@ jobs:
   python-deploy:
     name: 'shared-data package deploy'
     needs: [python-test]
-    runs-on: 'ubuntu-22.04'
+    runs-on: 'ubuntu-24.04'
     if: github.event_name == 'push'
     steps:
       - uses: 'actions/checkout@v4'

.github/workflows/step-generation-test.yaml

@@ -9,12 +9,18 @@ on:
       - 'shared-data/**'
       - 'package.json'
       - '.github/workflows/step-generation-test.yaml'
+      - '.github/actions/js/setup/action.yml'
+      - '.github/actions/git/resolve-tag/action.yml'
+      - '.github/actions/environment/complex-variables/action.yml'
   push:
     paths:
       - 'step-generation/**'
       - 'shared-data/**'
       - 'package.json'
       - '.github/workflows/step-generation-test.yaml'
+      - '.github/actions/js/setup/action.yml'
+      - '.github/actions/git/resolve-tag/action.yml'
+      - '.github/actions/environment/complex-variables/action.yml'
     branches:
       - '*'
 
@@ -32,36 +38,16 @@ env:
 jobs:
   js-unit-test:
     name: 'step generation unit tests'
-    runs-on: 'ubuntu-22.04'
-    timeout-minutes: 30
+    runs-on: 'ubuntu-24.04'
+    timeout-minutes: 20
     steps:
-      - uses: 'actions/checkout@v4'
-      - uses: 'actions/setup-node@v4'
-        with:
-          node-version: '22.11.0'
-      - name: 'install udev for usb-detection'
-        run: |
-          # WORKAROUND: Remove microsoft debian repo due to https://github.com/microsoft/linux-package-repositories/issues/130. Remove line below after it is resolved
-          sudo rm -f /etc/apt/sources.list.d/microsoft-prod.list
-          sudo apt-get update && sudo apt-get install libudev-dev
-      - name: 'cache yarn cache'
-        uses: actions/cache@v3
-        with:
-          path: |
-            ${{ github.workspace }}/.yarn-cache
-            ${{ github.workspace }}/.npm-cache
-          key: js-${{ secrets.GH_CACHE_VERSION }}-${{ runner.os }}-yarn-${{ hashFiles('yarn.lock') }}
-          restore-keys: |
-            js-${{ secrets.GH_CACHE_VERSION }}-${{ runner.os }}-yarn-
-      - name: 'setup-js'
-        run: |
-          npm config set cache ./.npm-cache
-          yarn config set cache-folder ./.yarn-cache
-          make setup-js
+      - name: 'Checkout Repository'
+        uses: actions/checkout@v4
+      - uses: ./.github/actions/js/setup
       - name: 'run step generation unit tests'
         run: make -C step-generation test-cov
       - name: 'Upload coverage report'
-        uses: codecov/codecov-action@v3
+        uses: codecov/codecov-action@v5
         with:
-          files: ./coverage/lcov.info
           flags: step-generation
+          token: ${{ secrets.CODECOV_TOKEN }}