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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -18,8 +18,8 @@ and can run in parallel:
1818 - ✅
1919 * - :mod: `~mdadash.backend.analyses.com_distance `
2020 - Distance between two center-of-masses
21- - ❌
22- - ❌
21+ - ✅
22+ - ✅
2323 * - :mod: `~mdadash.backend.analyses.contacts `
2424 - Contacts within a cutoff
2525 - ✅
@@ -46,8 +46,8 @@ and can run in parallel:
4646 - ✅
4747 * - :mod: `~mdadash.backend.analyses.janin `
4848 - Janin plot (Dihedral angles analysis)
49- - ❌
50- - ❌
49+ - —
50+ - —
5151 * - :mod: `~mdadash.backend.analyses.msd `
5252 - MSD Analysis
5353 - —
@@ -58,8 +58,8 @@ and can run in parallel:
5858 - ✅
5959 * - :mod: `~mdadash.backend.analyses.ramachandran `
6060 - Ramachandran plot (Dihedral angles analysis)
61- - ❌
62- - ❌
61+ - —
62+ - —
6363 * - :mod: `~mdadash.backend.analyses.rmsd `
6464 - RMSD Analysis
6565 - ✅
Original file line number Diff line number Diff line change @@ -26,10 +26,18 @@ class COMDistance(WidgetBase):
2626
2727 **Inputs**
2828
29- Selection 1
29+ Run frequency
3030 .. compound::
31- First MDAnalysis selection phrase
32- Default: ``protein``
31+ The frequency with which the widget is run - `every-frame` or `batch`
32+ Default: ``every-frame``
33+
34+ Run mode
35+ The mode in which the widget is run - `serial` or `parallel`
36+ Default: ``serial``
37+
38+ Selection 1
39+ First MDAnalysis selection phrase
40+ Default: ``protein``
3341
3442 Selection 2
3543 Second MDAnalysis selection phrase
@@ -74,6 +82,9 @@ class COMDistance(WidgetBase):
7482 .. figure:: /_static/images/com_distance_output.jpg
7583 :alt: COM Distance output
7684
85+ .. tip::
86+ This widget supports batching and can run in parallel
87+
7788 """
7889
7990 name = "COMDistance"
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