Documentation: broken links automatic report

[github-actions]

Summary

Status	Count
🔍 Total	1529
🔗 Unique	985
✅ Successful	974
⏳ Timeouts	14
🔀 Redirected	316
👻 Excluded	225
❓ Unknown	0
🚫 Errors	277
⛔ Unsupported	39

Errors per input

Errors in base/qaqc/vignettes/module_output.Rmd

• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/workflow.svg (at 11:1) | Rejected status code: 404 Not Found

Errors in base/utils/R/transformstats.R

• [403] https://doi.org/10.22541/au.158359749.96662550 (at 8:19) | Rejected status code: 403 Forbidden

Errors in base/utils/R/utils.R

• [403] http://www.jstor.org/stable/2290569 (at 176:172) | Rejected status code: 403 Forbidden

Errors in base/utils/tests/testthat/test.utils.R

• [ERROR] http://pecan/ (at 280:32) | Connection failed. Check network connectivity and firewall settings

Errors in base/visualization/R/visually.weighted.watercolor.plots.R

• [404] http://www.nicebread.de/visually-weighted-regression-in-r-a-la-solomon-hsiang/ (at 41:19) | Rejected status code: 404 Not Found
• [404] http://www.nicebread.de/visually-weighted-watercolor-plots-new-variants-please-vote/ (at 42:10) | Rejected status code: 404 Not Found

Errors in book_source/01_introduction/01_project_overview.Rmd

• [404] https://arpa-e.energy.gov/technologies/projects/reference-phenotyping-system-energy-sorghum (at 39:68) | Rejected status code: 404 Not Found
• [403] https://doi.org/10.1002/2013jg002392 (at 62:320) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1002/eap.1589 (at 55:127) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1111/gcb.13626 (at 57:466) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1111/gcb.13863 (at 54:230) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1111/gcb.13910 (at 56:178) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1111/gcbb.12420 (at 58:258) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1111/nph.14283 (at 59:313) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1111/pce.12043 (at 65:154) | Error (cached)
• [403] https://doi.org/10.1890/12-0137.1 (at 63:194) | Error (cached)
• [403] https://doi.org/10.1890/12-0854.1 (at 64:213) | Error (cached)
• [403] https://doi.org/10.1890/14-0497.1 (at 61:192) | Error (cached)
• [403] https://scholar.google.com/citations?hl=en&user=HWhxBY4AAAAJ (at 67:39) | Error (cached)
• [403] https://scholar.google.com/scholar?start=0&q= (at 68:97) | Rejected status code: 403 Forbidden

Errors in book_source/01_introduction/03_how_to_use_book.Rmd

• [ERROR] https://publicslack.com/slacks/pecanproject/invites/new (at 25:29) | Connection failed. Check network connectivity and firewall settings

Errors in book_source/02_demos_tutorials_workflows/03_web_workflow.Rmd

• [404] http://fluxnet.ornl.gov/site_status (at 129:521) | Rejected status code: 404 Not Found

Errors in book_source/02_demos_tutorials_workflows/04_more_web_interface/02_hidden_analyses.Rmd

• [404] https://paleon.geography.wisc.edu/doku.php/working_groups;state_data_assimilation (at 643:564) | Rejected status code: 404 Not Found

Errors in book_source/02_demos_tutorials_workflows/05_developer_workflows/02_git/01_using-git.Rmd

• [ERROR] http://tryk.github.com/ (at 24:12) | Connection failed. Check network connectivity and firewall settings
• [403] http://www.rstudio.com/ide/docs/packages/overview (at 246:29) | Rejected status code: 403 Forbidden
• [403] http://www.rstudio.com/ide/docs/version_control/overview (at 245:74) | Rejected status code: 403 Forbidden
• [403] http://www.rstudio.com/ide/docs/version_control/overview (at 248:81) | Rejected status code: 403 Forbidden

Errors in book_source/02_demos_tutorials_workflows/05_developer_workflows/04-testing.Rmd

• [404] https://pecanproject.github.io/pecan-documentation (at 154:143) | Rejected status code: 404 Not Found

Errors in book_source/02_demos_tutorials_workflows/05_developer_workflows/04_docker/02_quickstart.Rmd

• [ERROR] https://ebi-forecast.igb.illinois.edu/pecan/dump/all/bety.tar.gz (at 262:116) | Connection failed. Check network connectivity and firewall settings

Errors in book_source/02_demos_tutorials_workflows/05_developer_workflows/04_docker/04_models.Rmd

• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/include.mk.opt (at 182:118) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/include.mk.opt.Linux (at 94:35) | Rejected status code: 404 Not Found

Errors in book_source/02_demos_tutorials_workflows/05_developer_workflows/04_docker/07_migrate.Rmd

• [ERROR] http://server/bety/ (at 37:165) | Connection failed. Check network connectivity and firewall settings

Errors in book_source/02_demos_tutorials_workflows/05_developer_workflows/04_docker/08_pecan_api.Rmd

• [404] https://github.com/PecanProject/pecan/blob/develop/api/vignettes/pecanapi.Rmd (at 6:57) | Rejected status code: 404 Not Found

Errors in book_source/02_demos_tutorials_workflows/05_developer_workflows/04_docker/09_rabbitmq.Rmd

• [ERROR] error: (at 13:80) | Cannot parse 'amqp://username:password' into a URL: invalid port number

Errors in book_source/03_topical_pages/04_R_workflow.Rmd

• [403] https://doi.org/10.3334/ORNLDAAC/1763 (at 69:87) | Rejected status code: 403 Forbidden

Errors in book_source/03_topical_pages/05_models/ed.Rmd

• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/ED.r82.tgz (at 224:20) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/ED.r82.tgz (at 236:20) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/include.mk.lonestar (at 228:29) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/include.mk.stampede (at 240:29) | Rejected status code: 404 Not Found
• [403] http://moorcroftlab.oeb.harvard.edu/ (at 5:23) | Rejected status code: 403 Forbidden

Errors in book_source/03_topical_pages/05_models/stics.Rmd

• [404] http://www6.paca.inra.fr/stics_eng/ (at 30:127) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/06_data/01_meteorology.Rmd

• [403] https://opensource.ncsa.illinois.edu/confluence/display/CATS/Geostreams+API (at 144:334) | Rejected status code: 403 Forbidden
• [404] https://terraref.ncsa.illinois.edu/clowder/api/geostreams (at 144:101) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/07_remote_access/01_pecan_api.Rmd

• [ERROR] http://pecan-dev.ncsa.illinois.edu/swagger/ (at 26:86) | Connection failed. Check network connectivity and firewall settings

Errors in book_source/03_topical_pages/09_standalone_tools.Rmd

• [403] https://lpdaac.usgs.gov/ (at 154:738) | Rejected status code: 403 Forbidden

Errors in book_source/03_topical_pages/92_workflow_modules.Rmd

• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/workflow.svg (at 10:20) | Error (cached)
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/workflow.svg (at 10:77) | Error (cached)

Errors in book_source/03_topical_pages/93_installation/01_setup/PEcAn-in-the-Cloud.Rmd

• [404] http://isda.ncsa.illinois.edu/download/index.php?project=PEcAn&sort=category (at 14:60) | Rejected status code: 404 Not Found
• [404] http://www.rittmanmead.com/2014/09/obiee-sampleapp-in-the-cloud-importing-virtualbox-machines-to-aws-ec2/ (at 7:60) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/93_installation/01_setup/shiny.Rmd

• [403] https://www.rstudio.com/products/shiny/download-server/ (at 14:19) | Rejected status code: 403 Forbidden
• [ERROR] https://your.server.edu/shiny/your-location (at 18:303) | Connection failed. Check network connectivity and firewall settings

Errors in book_source/03_topical_pages/93_installation/01_setup/thredds.Rmd

• [ERROR] error: (at 91:31) | Cannot parse 'http://server:port/thredds/' into a URL: invalid port number
• [404] http://www.unidata.ucar.edu/software/thredds/current/tds/ (at 340:23) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/93_installation/03_install_OS/02_Installing-PEcAn-CentOS.Rmd

• [404] http://download.opensuse.org/repositories/home:/cornell_vrdc/CentOS_7/x86_64/jags3-3.4.0-54.1.x86_64.rpm (at 17:16) | Rejected status code: 404 Not Found
• [404] http://download.opensuse.org/repositories/home:/cornell_vrdc/CentOS_7/x86_64/jags3-devel-3.4.0-54.1.x86_64.rpm (at 18:16) | Rejected status code: 404 Not Found
• [404] http://yum.postgresql.org/9.4/redhat/rhel-7-x86_64/pgdg-centos94-9.4-1.noarch.rpm (at 56:16) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/93_installation/03_install_OS/04_Installing-PEcAn-OSX.Rmd

• [404] http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.11.tar.gz (at 34:28) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/93_installation/03_install_OS/05_install_BETY.Rmd

• [404] https://pecan.gitbook.io/betydb-documentation (at 13:5) | Rejected status code: 404 Not Found
• [404] https://pecan.gitbook.io/betydb-documentation (at 20:34) | Rejected status code: 404 Not Found
• [404] https://pecan.gitbook.io/betydb-documentation (at 57:3) | Rejected status code: 404 Not Found
• [404] https://raw.githubusercontent.com/PecanProject/pecan/main/scripts/load.bety.sh (at 24:86) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/93_installation/03_install_OS/06_install_models/install_DALEC.Rmd

• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/dalec_EnKF_pub.tgz (at 5:28) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/93_installation/03_install_OS/06_install_models/install_ED2.Rmd

• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/config.r46.xml (at 30:21) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/config.r82.xml (at 60:21) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/ED.r46.tgz (at 9:20) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/ED.r82.patch (at 44:22) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/ED.r82.tgz (at 39:20) | Error (cached)
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/ED2IN.r46 (at 28:15) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/ED2IN.r82 (at 58:15) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/include.mk.opt (at 15:23) | Error (cached)
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/include.mk.opt (at 47:23) | Error (cached)
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/include.mk.opt (at 72:23) | Error (cached)

Errors in book_source/03_topical_pages/93_installation/03_install_OS/06_install_models/install_LINKAGES.Rmd

• [404] https://github.com/araiho/Linkages.git (at 14:11) | Rejected status code: 404 Not Found

Errors in book_source/03_topical_pages/93_installation/03_install_OS/07_Installing-PEcAn-Data.Rmd

• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/create_met_driver.tar.gz (at 74:34) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/ed2ws.harvard.tgz (at 62:27) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/fia5data.psql.gz (at 28:26) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/inputs.tgz (at 17:20) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/plot.tgz (at 42:18) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/Santarem_Km83.zip (at 52:27) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/sites.tgz (at 11:19) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/testrun.PDG.zip (at 68:25) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/testrun.s83.zip (at 57:25) | Rejected status code: 404 Not Found

Errors in book_source/04_appendix/00_appendix.Rmd

• [ERROR] https://modex.bnl.gov/ (at 15:794) | Connection failed. Check network connectivity and firewall settings

Errors in book_source/04_appendix/03_courses_taught.Rmd

• [ERROR] http://eco.confex.com/eco/2013/webprogram/Session9007.html (at 36:63) | Connection failed. Check network connectivity and firewall settings
• [404] http://www.fluxcourse.org/files/SyllabusFluxcourse_2013.pdf (at 18:17) | Rejected status code: 404 Not Found
• [403] https://www3.nd.edu/~paleolab/paleonproject/summer-course/ (at 22:31) | Rejected status code: 403 Forbidden

Errors in book_source/04_appendix/07_singularity.Rmd

• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/inputs.tgz (at 26:25) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/Santarem_Km83.zip (at 39:32) | Rejected status code: 404 Not Found
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/sites.tgz (at 19:24) | Error (cached)
• [404] http://isda.ncsa.illinois.edu/~kooper/EBI/testrun.s83.zip (at 32:30) | Rejected status code: 404 Not Found

Errors in book_source/06_reference/02_models/sibcasa.Rmd

• [ERROR] https://www.pgroup.com/products/community.htm (at 24:1) | Connection failed. Check network connectivity and firewall settings

Errors in book_source/index.Rmd

• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 46:20) | Error (cached)

Errors in contrib/browndog/README.md

• [403] https://opensource.ncsa.illinois.edu/confluence/display/BD/Adding+Conversions+to+the+DAP+and+Calling+the+DAP (at 6:1) | Rejected status code: 403 Forbidden

Errors in CONTRIBUTING.md

• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 16:129) | Rejected status code: 403 Forbidden

Errors in DEV-INTRO.md

• [ERROR] file:///home/runner/work/pecan/pecan/docker-compose.dev.yaml (at 56:240) | File not found. Check if file exists and path is correct

Errors in docker/docs/index.html

• [ERROR] error: (at 30:18) | Cannot resolve root-relative link '/pecan/': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 36:18) | Cannot resolve root-relative link '/bety/': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 42:18) | Cannot resolve root-relative link '/rstudio/': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 48:20) | Cannot resolve root-relative link '/pecan/history.php': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 50:18) | Cannot resolve root-relative link '/minio/': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 55:18) | Cannot resolve root-relative link '/thredds/': To resolve root-relative links in local files, provide a root dir
• [ERROR] file:///home/runner/work/pecan/pecan/docker/docs/docs/pecan (at 67:20) | File not found. Check if file exists and path is correct
• [ERROR] file:///home/runner/work/pecan/pecan/docker/docs/pkgdocs (at 68:20) | File not found. Check if file exists and path is correct
• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 84:17) | Rejected status code: 403 Forbidden

Errors in documentation/index_vm.html

• [ERROR] error: (at 10:20) | Cannot resolve root-relative link '/pecan/history.php': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 11:20) | Cannot resolve root-relative link '/rstudio/': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 12:20) | Cannot resolve root-relative link '/pecan/setups/': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 7:20) | Cannot resolve root-relative link '/pecan/': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 8:20) | Cannot resolve root-relative link '/bety/': To resolve root-relative links in local files, provide a root dir
• [ERROR] error: (at 9:20) | Cannot resolve root-relative link '/shiny/': To resolve root-relative links in local files, provide a root dir
• [ERROR] file:///home/runner/work/pecan/pecan/documentation/pecan.pdf (at 31:20) | File not found. Check if file exists and path is correct
• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 16:17) | Rejected status code: 403 Forbidden

Errors in documentation/tutorials/Demo_02_Uncertainty_Analysis/uncertainty.qmd

• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 546:332) | Error (cached)

Errors in documentation/tutorials/Demo_03_Meta_Analysis/meta_analysis.qmd

• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 294:332) | Error (cached)

Errors in documentation/tutorials/Demo_1_Basic_Run/download_sipnet.R

• [404] https://github.com/PecanProject/sipnet/releases/download/v1.3.0/ (at 8:14) | Rejected status code: 404 Not Found

Errors in documentation/tutorials/old/01_Demo_Basic_Run/Demo01.Rmd

• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 118:536) | Error (cached)

Errors in documentation/tutorials/old/02_Demo_Uncertainty_Analysis/Demo02.Rmd

• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 123:332) | Error (cached)

Errors in models/biocro/inst/salix_benchmarks.Rmd

• [404] https://www.betydb.org/miscanthusyield.csv (at 40:10) | Rejected status code: 404 Not Found

Errors in models/biocro/R/model2netcdf.BIOCRO.R

• [404] http://cf-pcmdi.llnl.gov/documents/cf-conventions/1.4/cf-conventions.html#scalar-coordinate-variables (at 24:6) | Rejected status code: 404 Not Found

Errors in models/cable/README.md

• [ERROR] https://trac.nci.org.au/trac/cable/wiki/CableUserGuide (at 4:1) | Connection failed. Check network connectivity and firewall settings

Errors in models/dalec/inst/README.Rmd

• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/1126 (at 77:17) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/1130 (at 84:13) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/1234 (at 17:12) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/1235 (at 38:13) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/1236 (at 29:13) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/1237 (at 46:13) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/1240 (at 69:12) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/552 (at 16:12) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/889 (at 37:13) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/890 (at 28:13) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/891 (at 45:13) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/892 (at 68:12) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://ebi-forecast.igb.illinois.edu/redmine/issues/893 (at 36:13) | Connection failed. Check network connectivity and firewall settings

Errors in models/dvmdostem/R/model2netcdf.dvmdostem.R

• [404] Update output netcdf units attribute to include correct time denomination uaf-arctic-eco-modeling/dvm-dos-tem#336 (at 52:27) | Rejected status code: 404 Not Found

Errors in models/jules/README.md

• [404] https://jules.jchmr.org/software-and-documentation/previous-releases/jules-v4.2 (at 5:1) | Rejected status code: 404 Not Found

Errors in models/rothc/inst/workflow_example/ERA5_nc_to_RothC.R

• [404] https://github.com/ccmmf/workflows/blob/main/2a_grass/01_ERA5_nc_to_clim.R (at 17:3) | Rejected status code: 404 Not Found

Errors in models/sibcasa/R/met2model.SIBCASA.R

• [404] https://pecanproject.github.io/pecan-documentation/latest/coding-style.html (at 19:5) | Rejected status code: 404 Not Found

Errors in modules/allometry/inst/manuscript/Allom.Rmd

• [403] http://www.ingentaconnect.com/content/saf/fs/2003/00000049/00000001/art00002 (at 132:189) | Rejected status code: 403 Forbidden

Errors in modules/assim.sequential/inst/anchor/IC_prep_anchorSites.Rmd

• [403] https://doi.org/10.3334/ORNLDAAC/1763 (at 82:8) | Error (cached)

Errors in modules/assim.sequential/inst/hf_landscape/01_SiteSelection.Rmd

• [409] https://cpdataeuwest.blob.core.windows.net/cpdata/raw/nlcd/conus/30m/2016.tif (at 111:8) | Rejected status code: 409 Conflict

Errors in modules/assim.sequential/inst/NEFI/US_Los/download_Los.R

• [404] http://co2.aos.wisc.edu/data/cheas/lcreek/flux/current/ameriflux/US-Los_HH_ (at 7:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_Los/download_Los_met.R

• [404] http://co2.aos.wisc.edu/data/cheas/lcreek/flux/current/ameriflux/US-Los_HH_ (at 7:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_Potato/download_Potato.R

• [404] http://co2.aos.wisc.edu/data/potato/current/Potato_flux_ (at 45:23) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_Syv/download_soilmoist_Syv.R

• [404] http://co2.aos.wisc.edu/data/cheas/sylvania/flux/prelim/clean/ameriflux/US-Syv_HH_ (at 2:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_Syv/download_Syv.R

• [404] http://co2.aos.wisc.edu/data/cheas/sylvania/flux/current/ameriflux/US-Syv_HH_ (at 7:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_Syv/download_Syv_met.R

• [404] http://co2.aos.wisc.edu/data/cheas/sylvania/flux/current/ameriflux/US-Syv_HH_ (at 7:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_WCr/download_soilmoist_WCr.R

• [404] http://co2.aos.wisc.edu/data/cheas/wcreek/flux/prelim/clean/ameriflux/US-WCr_HH_ (at 2:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_WCr/download_WCr.R

• [404] http://co2.aos.wisc.edu/data/cheas/wcreek/flux/prelim/wcreek (at 2:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_WCr/download_WCr_met.R

• [404] http://co2.aos.wisc.edu/data/cheas/wcreek/flux/prelim/wcreek (at 2:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/NEFI/US_WLEF/download_soilmoist_WLEF.R

• [404] http://co2.aos.wisc.edu/data/cheas/wlef/flux/prelim/clean/ameriflux/US-PFa_HR_ (at 2:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/bmorrison/ecoregion_lai_agb_trends.R

• [404] https://raw.githubusercontent.com/serbinsh/pecan/download_osu_agb/modules/data.remote/R/LandTrendr.AGB.R (at 161:19) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/bmorrison/Multisite_SDA_Bailey.R

• [404] https://raw.githubusercontent.com/serbinsh/pecan/download_osu_agb/modules/data.remote/R/LandTrendr.AGB.R (at 36:21) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/bmorrison/Multisite_SDA_Bailey_AGB_LAI.R

• [404] https://raw.githubusercontent.com/serbinsh/pecan/download_osu_agb/modules/data.remote/R/LandTrendr.AGB.R (at 36:21) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/bmorrison/Multisite_SDA_Shawn.R

• [404] https://raw.githubusercontent.com/serbinsh/pecan/download_osu_agb/modules/data.remote/R/LandTrendr.AGB.R (at 36:19) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/sserbin/R_scripts_2/Multisite_SDA_BNL.R

• [404] https://raw.githubusercontent.com/serbinsh/pecan/download_osu_agb/modules/data.remote/R/LandTrendr.AGB.R (at 36:19) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/sserbin/R_scripts_2/Multisite_SDA_BNL_updated.R

• [404] https://raw.githubusercontent.com/serbinsh/pecan/download_osu_agb/modules/data.remote/R/LandTrendr.AGB.R (at 36:19) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/sserbin/R_scripts_2/workflow_doconversions.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 8:3) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/sserbin/R_scripts_2/workflow_metprocess.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 8:3) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/sserbin/workflow.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 8:3) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/sda_backup/sserbin/workflow_2.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 8:3) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/WillowCreek/download_soilmoist_WCr.R

• [404] http://co2.aos.wisc.edu/data/cheas/wcreek/flux/prelim/clean/ameriflux/US-WCr_HH_ (at 2:16) | Rejected status code: 404 Not Found

Errors in modules/assim.sequential/inst/WillowCreek/download_WCr.R

• [404] http://co2.aos.wisc.edu/data/cheas/wcreek/flux/prelim/wcreek (at 2:16) | Rejected status code: 404 Not Found
• [404] http://co2.aos.wisc.edu/data/cheas/wcreek/flux/prelim/wcreek (at 51:16) | Rejected status code: 404 Not Found

Errors in modules/benchmark/inst/scripts/benchmark.workflow.FATES_BCI.R

• [ERROR] https://bd-api.ncsa.illinois.edu/ (at 53:27) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://bd-api.ncsa.illinois.edu/ (at 54:31) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://bd-api.ncsa.illinois.edu/ (at 55:32) | Connection failed. Check network connectivity and firewall settings

Errors in modules/data.atmosphere/inst/scripts/GetLSHRG.R

• [ERROR] http://hydrology.princeton.edu/data/pgf/1.0deg/3hourly/ (at 9:24) | Connection failed. Check network connectivity and firewall settings

Errors in modules/data.atmosphere/inst/scripts/NARRinventory.R

• [ERROR] http://dss.ucar.edu/datazone/dsszone/ds608.0/NARR/3HRLY_TAR/ (at 42:89) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://dss.ucar.edu/cgi-bin/login (at 18:153) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://dss.ucar.edu/datazone/dsszone/ds608.0/NARR/3HRLY_TAR/ (at 36:89) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://dss.ucar.edu/datazone/dsszone/ds608.0/NARR/3HRLY_TAR/ (at 39:89) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://dss.ucar.edu/datazone/dsszone/ds608.0/NARR/3HRLY_TAR/ (at 45:89) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://dss.ucar.edu/datazone/dsszone/ds608.0/NARR/3HRLY_TAR/ (at 68:89) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://dss.ucar.edu/datazone/dsszone/ds608.0/NARR/3HRLY_TAR/ (at 71:89) | Connection failed. Check network connectivity and firewall settings
• [ERROR] https://dss.ucar.edu/datazone/dsszone/ds608.0/NARR/3HRLY_TAR/ (at 74:89) | Connection failed. Check network connectivity and firewall settings

Errors in modules/data.atmosphere/R/debias_met_regression.R

• [403] http://eesc.columbia.edu/courses/ees/climate/lectures/radiation/ (at 708:20) | Rejected status code: 403 Forbidden
• [403] http://eesc.columbia.edu/courses/ees/climate/lectures/radiation/ (at 781:26) | Rejected status code: 403 Forbidden
• [403] http://www.tandfonline.com/doi/full/10.1080/07055900.2012.760441 (at 725:55) | Rejected status code: 403 Forbidden

Errors in modules/data.atmosphere/R/download.Ameriflux.R

• [ERROR] http://cdiac.ornl.gov/ftp/ameriflux/data/Level2/Sites_ByID/ (at 42:22) | Connection failed. Check network connectivity and firewall settings

Errors in modules/data.atmosphere/R/download.CRUNCEP_Global.R

• [400] https://thredds.daac.ornl.gov/thredds/dodsC/ornldaac/1220/ (at 179:25) | Rejected status code: 400 Bad Request
• [400] https://thredds.daac.ornl.gov/thredds/ncss/grid/ornldaac/1220/ (at 180:22) | Rejected status code: 400 Bad Request
• [400] https://thredds.daac.ornl.gov/thredds/ncss/ornldaac/1220/ (at 61:6) | Rejected status code: 400 Bad Request

Errors in modules/data.atmosphere/R/download.Geostreams.R

• [404] https://terraref.ncsa.illinois.edu/clowder/api/geostreams (at 41:40) | Error (cached)

Errors in modules/data.atmosphere/R/download.GLDAS.R

• [400] http://hydro1.sci.gsfc.nasa.gov/thredds/dodsC/GLDAS_NOAH10SUBP_3H (at 48:16) | Rejected status code: 400 Bad Request

Errors in modules/data.atmosphere/R/download.ICOS.R

• [404] http://meta.icos-cp.eu/resources/cpmeta/dought2018ArchiveProduct (at 56:10) | Rejected status code: 404 Not Found
• [500] http://meta.icos-cp.eu/resources/stations/ES_sitename (at 113:26) | Rejected status code: 500 Internal Server Error
• [404] https://data.icos-cp.eu/licence_accept?ids=%5B%22 (at 160:17) | Rejected status code: 404 Not Found
• [400] https://meta.icos-cp.eu/sparql?type=JSON (at 103:15) | Rejected status code: 400 Bad Request

Errors in modules/data.atmosphere/R/download.MACA.R

• [400] http://thredds.northwestknowledge.net:8080/thredds/dodsC/MACAV2 (at 55:15) | Rejected status code: 400 Bad Request

Errors in modules/data.atmosphere/R/download.MsTMIP_NARR.R

• [404] http://thredds.daac.ornl.gov/thredds/dodsC/ornldaac/1220/mstmip_driver_na_qd_climate_ (at 41:17) | Rejected status code: 404 Not Found
• [404] http://thredds.daac.ornl.gov/thredds/dodsC/ornldaac/1220/mstmip_driver_na_qd_dswrf_ (at 88:30) | Rejected status code: 404 Not Found

Errors in modules/data.atmosphere/R/download.NARR_site.R

• [ERROR] http://ashiklom/ (at 324:6) | Connection failed. Check network connectivity and firewall settings

Errors in modules/data.atmosphere/R/download.NLDAS.R

• [400] http://hydro1.sci.gsfc.nasa.gov/thredds/dodsC/NLDAS_FORA0125_H.002 (at 49:16) | Rejected status code: 400 Bad Request

Errors in modules/data.atmosphere/R/download.US_WCr.R

• [404] http://co2.aos.wisc.edu/data/cheas/wcreek/flux/prelim/wcreek (at 34:16) | Error (cached)
• [404] http://flux.aos.wisc.edu/data/cheas/wcreek/flux/prelim/wcreek2018_flux.txt (at 33:19) | Rejected status code: 404 Not Found

Errors in modules/data.atmosphere/R/download.US_Wlef.R

• [404] http://flux.aos.wisc.edu/data/cheas/wcreek/flux/prelim/wcreek2018_flux.txt (at 29:19) | Rejected status code: 404 Not Found
• [404] http://flux.aos.wisc.edu/data/cheas/wlef/flux/prelim/ (at 30:16) | Rejected status code: 404 Not Found

Errors in modules/data.atmosphere/R/extract_ERA5.R

• [404] https://confluence.ecmwf.int/display/CKB/ERA5/%3A+data+documentation (at 20:10) | Rejected status code: 404 Not Found

Errors in modules/data.atmosphere/R/extract_local_CMIP5.R

• [400] http://hydro1.sci.gsfc.nasa.gov/thredds/dodsC/NLDAS_FORA0125_H.002 (at 64:16) | Rejected status code: 400 Bad Request
• [405] https://journals.ametsoc.org/doi/10.1175/JCLI-3299.1 (at 90:33) | Rejected status code: 405 Method Not Allowed

Errors in modules/data.atmosphere/R/extract_local_NLDAS.R

• [400] http://hydro1.sci.gsfc.nasa.gov/thredds/dodsC/NLDAS_FORA0125_H.002 (at 38:16) | Rejected status code: 400 Bad Request

Errors in modules/data.atmosphere/R/GEFS_helper_functions.R

• [500] https://nomads.ncep.noaa.gov/cgi-bin/filter_gefs_atmos_0p50a.pl?file= (at 38:22) | Rejected status code: 500 Internal Server Error

Errors in modules/data.atmosphere/R/metutils.R

• [405] https://doi.org/10.1175/BAMS-86-2-225 (at 183:5) | Rejected status code: 405 Method Not Allowed

Errors in modules/data.atmosphere/R/tdm_lm_ensemble_sims.R

• [403] http://eesc.columbia.edu/courses/ees/climate/lectures/radiation/ (at 391:20) | Error (cached)
• [403] http://www.tandfonline.com/doi/full/10.1080/07055900.2012.760441 (at 408:55) | Error (cached)

Errors in modules/data.atmosphere/tests/testthat.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 7:3) | Error (cached)

Errors in modules/data.atmosphere/vignettes/ameriflux_demo.Rmd

• [ERROR] http://research.jisao.washington.edu/data_sets/nco/#example8 (at 56:113) | Connection refused - server may be down or port blocked

Errors in modules/data.land/data-raw/create_fertilizer_data.R

• [404] https://raw.githubusercontent.com/swat-model/swatplus/refs/heads/main/data/Osu_1hru/fertilizer.frt (at 22:22) | Rejected status code: 404 Not Found

Errors in modules/data.land/inst/LoadFLUXNETsites.R

• [ERROR] file:///home/dietze/ListofAmeriFluxSites.html (at 48:27) | File not found. Check if file exists and path is correct
• [404] http://fluxnet.ornl.gov/site/ (at 118:20) | Rejected status code: 404 Not Found
• [404] http://fluxnet.ornl.gov/site_status (at 116:25) | Error (cached)

Errors in modules/data.land/inst/Multi_Site_IC_Process_Script.R

• [404] https://data.neonscience.org/api/v0 (at 11:43) | Error (cached)

Errors in modules/data.land/R/calculate_co2_equivalent.R

• [404] https://ghgprotocol.org/global-warming-potential-values (at 52:15) | Rejected status code: 404 Not Found
• [405] https://ww2.arb.ca.gov/ghg-gwps (at 54:91) | Rejected status code: 405 Method Not Allowed

Errors in modules/data.land/R/data.R

• [403] https://escholarship.org/uc/item/5mk2q1sm (at 238:11) | Rejected status code: 403 Forbidden

Errors in modules/data.land/R/download.SM_CDS.R

• [404] https://cds.climate.copernicus.eu/api/v2 (at 134:18) | Rejected status code: 404 Not Found

Errors in modules/data.land/R/extract_NEON_veg.R

• [404] https://data.neonscience.org/api/v0 (at 104:161) | Error (cached)
• [404] https://data.neonscience.org/api/v0 (at 10:90) | Error (cached)
• [404] https://data.neonscience.org/api/v0 (at 123:170) | Error (cached)
• [404] https://data.neonscience.org/api/v0 (at 169:187) | Error (cached)
• [404] https://data.neonscience.org/api/v0 (at 54:47) | Error (cached)
• [404] https://data.neonscience.org/api/v0 (at 67:159) | Error (cached)
• [404] https://data.neonscience.org/api/v0 (at 87:159) | Error (cached)

Errors in modules/data.land/R/fia2ED.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 7:3) | Error (cached)

Errors in modules/data.land/R/fuse_plot_treering.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 7:3) | Error (cached)

Errors in modules/data.land/R/gis.functions.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 7:3) | Error (cached)

Errors in modules/data.land/R/gSSURGO_Query.R

• [ERROR] https://www.nrcs.usda.gov/sites/default/files/2022-08/SSURGO-Metadata-Tables-and-Columns-Report.pdf (at 21:90) | HTTP/2 protocol error. Server may not support HTTP/2 properly

Errors in modules/data.land/R/land.utils.R

• [ERROR] http://www.earthtools.org/height (at 4:18) | Connection failed. Check network connectivity and firewall settings

Errors in modules/data.land/R/look_up_ca_n_rate.R

• [403] https://escholarship.org/uc/item/5mk2q1sm (at 23:11) | Error (cached)

Errors in modules/data.land/R/look_up_fertilizer_components.R

• [404] https://github.com/swat-model/swatplus/blob/main/data/Osu_1hru/fertilizer.frt (at 5:40) | Rejected status code: 404 Not Found

Errors in modules/data.land/R/openET.R

• [405] https://openet-api.org/raster/timeseries/point (at 44:21) | Rejected status code: 405 Method Not Allowed

Errors in modules/data.land/R/plot2AGB.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 7:3) | Error (cached)

Errors in modules/data.land/R/read.plot.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 7:3) | Error (cached)

Errors in modules/data.land/R/soilgrids_soc_extraction.R

• [404] https://files.isric.org/soilgrids/latest/data/ocd/ocd_ (at 84:74) | Rejected status code: 404 Not Found
• [403] https://www.sciencedirect.com/science/article/pii/S2215016122000462 (at 212:160) | Rejected status code: 403 Forbidden
• [403] https://www.sciencedirect.com/science/article/pii/S2215016122000462 (at 214:153) | Rejected status code: 403 Forbidden

Errors in modules/data.land/R/soilgrids_texture_extract.R

• [404] https://files.isric.org/soilgrids/latest/data/clay/clay_ (at 15:70) | Rejected status code: 404 Not Found
• [404] https://files.isric.org/soilgrids/latest/data/sand/sand_ (at 11:70) | Rejected status code: 404 Not Found
• [404] https://files.isric.org/soilgrids/latest/data/silt/silt_ (at 19:70) | Rejected status code: 404 Not Found

Errors in modules/data.land/tests/testthat.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 7:3) | Error (cached)

Errors in modules/data.mining/inst/NEON_soils/root_validation.Rmd

• [404] https://data.neonscience.org/api/v0 (at 273:155) | Rejected status code: 404 Not Found

Errors in modules/data.mining/inst/NEON_soils/soilmoist_validation.Rmd

• [404] https://data.neonscience.org/api/v0 (at 231:153) | Rejected status code: 404 Not Found

Errors in modules/data.remote/R/download.thredds.AVHRR.monthAGG.R

• [400] https://www.ncei.noaa.gov/thredds/dodsC/cdr/lai/files (at 24:19) | Rejected status code: 400 Bad Request

Errors in modules/data.remote/R/download.thredds.AVHRR.R

• [400] https://www.ncei.noaa.gov/thredds/dodsC/cdr/lai/files (at 22:19) | Rejected status code: 400 Bad Request
• [400] https://www.ncei.noaa.gov/thredds/dodsC/cdr/lai/files/1995/ (at 143:8) | Rejected status code: 400 Bad Request

Errors in modules/data.remote/R/download.thredds.R

• [404] https://www.ncei.noaa.gov/thredds/catalog/cdr/lai/files/1981/catalog.html (at 119:7) | Rejected status code: 404 Not Found
• [400] https://www.ncei.noaa.gov/thredds/dodsC/cdr/lai/files (at 82:19) | Rejected status code: 400 Bad Request
• [404] https://www.ncei.noaa.gov/thredds/dodsC/cdr/lai/files/1981/AVHRR-Land_v005_AVH15C1_NOAA-07_19810624_c20181025194251.nc.html (at 163:7) | Rejected status code: 404 Not Found
• [400] https://www.ncei.noaa.gov/thredds/dodsC/cdr/lai/files/1995/ (at 224:8) | Rejected status code: 400 Bad Request

Errors in modules/data.remote/R/NASA_DAAC_download.R

• [400] https://cmr.earthdata.nasa.gov/search/granules.json?pretty=true (at 344:16) | Rejected status code: 400 Bad Request
• [400] https://cmr.earthdata.nasa.gov/search/granules.json?pretty=true (at 366:39) | Rejected status code: 400 Bad Request
• [403] https://daac.ornl.gov/cgi-bin/dsviewer.pl?ds_id=2056 (at 19:4) | Rejected status code: 403 Forbidden
• [403] https://daac.ornl.gov/cgi-bin/dsviewer.pl?ds_id=2056 (at 386:4) | Rejected status code: 403 Forbidden

Errors in modules/data.remote/R/NLCD.R

• [ERROR] http://gisdata.usgs.gov/TDDS/DownloadFile.php?TYPE=nlcd2001v2&FNAME=nlcd_2001_landcover_2011_edition_2014_10_10.zip (at 15:17) | Connection failed. Check network connectivity and firewall settings
• [ERROR] http://gisdata.usgs.gov/TDDS/DownloadFile.php?TYPE=nlcd2011&FNAME=nlcd_2011_landcover_2011_edition_2014_10_10.zip (at 18:17) | Connection failed. Check network connectivity and firewall settings
• [404] http://mbjoseph.github.io/2014/11/08/nlcd.html (at 69:77) | Rejected status code: 404 Not Found

Errors in modules/data.remote/R/Prep_AGB_IC_from_2010_global.R

• [403] https://doi.org/10.3334/ORNLDAAC/1763 (at 3:58) | Error (cached)

Errors in modules/priors/vignettes/priors_demo.Rmd

• [404] https://dl.dropboxusercontent.com/u/18092793/fit.perc_example.PNG (at 362:54) | Rejected status code: 404 Not Found

Errors in README.md

• [403] https://doi.org/10.1111/pce.12043 (at 74:135) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1890/12-0137.1 (at 72:171) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1890/12-0854.1 (at 73:191) | Rejected status code: 403 Forbidden
• [403] https://doi.org/10.1890/14-0497.1 (at 76:186) | Rejected status code: 403 Forbidden
• [403] https://join.slack.com/t/pecanproject/shared_invite/enQtMzkyODUyMjQyNTgzLWEzOTM1ZjhmYWUxNzYwYzkxMWVlODAyZWQwYjliYzA0MDA0MjE4YmMyOTFhMjYyMjYzN2FjODE4N2Y4YWFhZmQ (at 3:1) | Rejected status code: 403 Forbidden
• [403] https://scholar.google.com/citations?hl=en&user=HWhxBY4AAAAJ (at 80:82) | Rejected status code: 403 Forbidden

Errors in scripts/build_pkgdown.R

• [404] https://github.com/PecanProject/pecan/blob/ (at 30:22) | Rejected status code: 404 Not Found

Errors in scripts/workflow.bm.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 8:3) | Error (cached)

Errors in scripts/workflow.pda.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 9:3) | Error (cached)

Errors in scripts/workflow.wcr.assim.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 8:3) | Error (cached)

Errors in shiny/Data-Ingest/modules/d1_download_module.R

• [ERROR] http://www.lettersmarket.com/uploads/lettersmarket/blog/loaders/common_green/ajax_loader_green_64.gif (at 18:145) | Connection failed. Check network connectivity and firewall settings

Errors in shiny/Data-Ingest/ui_files/d1_download_ui.R

• [ERROR] http://www.lettersmarket.com/uploads/lettersmarket/blog/loaders/common_green/ajax_loader_green_64.gif (at 12:143) | Error (cached)

Errors in shiny/dbsync/app.R

• [ERROR] http://free.ipwhois.io/json/ (at 42:48) | Connection failed. Check network connectivity and firewall settings

Errors in shiny/ForecastingDashboard/WcR_Test.Rmd

• [404] http://pecan2.bu.edu/pecan/08-finished.php?workflowid= (at 410:17) | Rejected status code: 404 Not Found

Errors in shiny/SDAdashboard/server.R

• [401] https://api.mapbox.com/styles/v1/para2x/ciwiaedba003y2qliqe3lt5vj/tiles/256/%7Bz%7D/%7Bx%7D/%7By%7D?access_token=pk.eyJ1IjoicGFyYTJ4IiwiYSI6ImNpcTJraDAzZDAxNTVmc25uNnkycTF4dHcifQ.fnJLW8J0XIIsG0Wv3HXO7A (at 29:14) | Rejected status code: 401 Unauthorized
• [401] https://api.mapbox.com/styles/v1/para2x/cja2s4zhq10si2ul5btb1q6w9/tiles/256/%7Bz%7D/%7Bx%7D/%7By%7D@2x?access_token=pk.eyJ1IjoicGFyYTJ4IiwiYSI6ImNpcTJraDAzZDAxNTVmc25uNnkycTF4dHcifQ.fnJLW8J0XIIsG0Wv3HXO7A (at 30:16) | Rejected status code: 401 Unauthorized

Errors in shiny/workflowPlot/ui.R

• [ERROR] https://publicslack.com/slacks/pecanproject/invites/new (at 77:106) | Error (cached)

Errors in web/plot.netcdf.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 7:3) | Error (cached)

Errors in web/workflow.R

• [404] http://opensource.ncsa.illinois.edu/license.html (at 8:3) | Error (cached)

Timeouts per input

Timeouts in base/db/R/pft.add.spp.R

• [TIMEOUT] http://plants.usda.gov/ (at 7:47) | Request timed out

Timeouts in book_source/03_topical_pages/08_Database-Synchronization.Rmd

• [TIMEOUT] http://psql-pecan.bu.edu/sync/dump/bety.tar.gz (at 87:11) | Request timed out
• [TIMEOUT] https://pecan2.bu.edu/pecan/status.php (at 254:1) | Request timed out

Timeouts in book_source/03_topical_pages/11_adding_to_pecan.Rmd

• [TIMEOUT] https://psql-pecan.bu.edu/bety/inputs/1000013064# (at 429:283) | Request timed out

Timeouts in book_source/03_topical_pages/93_installation/01_setup/shiny.Rmd

• [TIMEOUT] https://test-pecan.bu.edu/shiny/ashiklom/workflowPlots (at 48:53) | Request timed out

Timeouts in book_source/04_appendix/03_courses_taught.Rmd

• [TIMEOUT] http://blue.for.msu.edu/macrosystems/workshop (at 28:1) | Request timed out

Timeouts in modules/data.atmosphere/R/download.Fluxnet2015.R

• [TIMEOUT] http://wile.lbl.gov:8080/AmeriFlux/DataDownload.svc/datafileURLs (at 36:11) | Request timed out

Timeouts in modules/data.atmosphere/R/download.FluxnetLaThuile.R

• [TIMEOUT] http://www.fluxdata.org/DataInfo/Dataset/%20Doc/%20Lib/SynthDataSummary.aspx (at 14:36) | Request timed out

Timeouts in modules/data.atmosphere/R/download.GFDL.R

• [TIMEOUT] http://nomads.gfdl.noaa.gov:9192/opendap/CMIP5/output1/NOAA-GFDL/GFDL (at 49:16) | Request timed out

Timeouts in modules/data.atmosphere/R/download.PalEON_ENS.R

• [TIMEOUT] https://pods.iplantcollaborative.org/wiki/display/DS/Setting+Up+iCommands (at 26:18) | Request timed out

Timeouts in modules/data.atmosphere/tests/testthat/test.download.GFDLR.R

• [TIMEOUT] http://nomads.gfdl.noaa.gov:9192/opendap/ (at 11:23) | Request timed out

Timeouts in modules/data.land/inst/download_vswc.R

• [TIMEOUT] https://data.ecoforecast.org/targets/terrestrial/terrestrial_daily-targets.csv.gz (at 17:29) | Request timed out

Timeouts in modules/data.land/R/gSSURGO_Query.R

• [TIMEOUT] http://sdmdataaccess.nrcs.usda.gov/Tabular/SDMTabularService.asmx (at 70:33) | Request timed out
• [TIMEOUT] http://sdmdataaccess.nrcs.usda.gov/Tabular/SDMTabularService.asmx/RunQuery (at 96:23) | Request timed out

Full Github Actions output