Merge pull request #329 from tientong98/fix-issue-283

Fix issue #283: Rename Key Group to Entity Set

Author: tien-tong

.circleci/config.yml

@@ -9,7 +9,7 @@ jobs:
         type: string
         default: "3.8"
     machine:
-      image: ubuntu-2004:202201-02
+      image: ubuntu-2404:2024.08.1
     working_directory: /home/circleci/src/CuBIDS
     steps:
       - checkout:
@@ -34,7 +34,7 @@ jobs:
             # Add nodejs and the validator
             conda install nodejs
             npm install -g yarn && \
-            npm install -g bids-validator
+            npm install -g bids-validator@1.14.14-dev.0
 
             # Install CuBIDS
             pip install -e .[tests]
@@ -83,7 +83,7 @@ jobs:
 
   deploy_pypi:
     machine:
-      image: ubuntu-2004:202201-02
+      image: ubuntu-2404:2024.08.1
     working_directory: /home/circleci/src/CuBIDS
     steps:
       - checkout:

cubids/cli.py

@@ -230,7 +230,7 @@ def _parse_apply():
         action="store",
         help=(
             "path to the _summary.tsv that has been edited "
-            "in the MergeInto and RenameKeyGroup columns. If the "
+            "in the MergeInto and RenameEntitySet columns. If the "
             " summary table is located in the code/CuBIDS "
             "directory, then users can just pass the summary tsv "
             "filename instead of the full path to the tsv"
@@ -242,7 +242,7 @@ def _parse_apply():
         action="store",
         help=(
             "path to the _files.tsv that has been edited "
-            "in the MergeInto and RenameKeyGroup columns. If the "
+            "in the MergeInto and RenameEntitySet columns. If the "
             "files table is located in the code/CuBIDS "
             "directory, then users can just pass the files tsv "
             "filename instead of the full path to the tsv"

cubids/constants.py

@@ -1,9 +1,9 @@
 """Constants for CuBIDS."""
 
 # Names of identifier variables.
-# Used to place KeyGroup and ParamGroup at the beginning of a dataframe,
+# Used to place EntitySet and ParamGroup at the beginning of a dataframe,
 # but both are hardcoded in the relevant function.
-ID_VARS = set(["KeyGroup", "ParamGroup", "FilePath"])
+ID_VARS = set(["EntitySet", "ParamGroup", "FilePath"])
 # Entities that should not be used to group parameter sets
 NON_KEY_ENTITIES = set(["subject", "session", "extension"])
 # Multi-dimensional keys SliceTiming  XXX: what is this line about?

cubids/cubids.py

@@ -177,13 +177,13 @@ relational_params:
   FieldmapKey:
     # can be
     # "bool": a single column with true if an IntendedFor is present
-    # "columns": List all intended key groups in separate columns (IntendedForXX)
+    # "columns": List all intended entity sets in separate columns (IntendedForXX)
     display_mode: bool
     suggest_variant_rename: yes
   IntendedForKey:
     # can be
     # "bool": a single column with true if an IntendedFor is present
-    # "columns": List all intended key groups in separate columns (IntendedForXX)
+    # "columns": List all intended entity sets in separate columns (IntendedForXX)
     display_mode: bool
     suggest_variant_rename: yes
 # BIDS fields to directly include in the Parameter Groupings

cubids/data/config.yml

@@ -54,10 +54,10 @@ def _check_sdc_cols(meta1, meta2):
 
     needs_merge = actions[np.isfinite(actions["MergeInto"])]
     for _, row_needs_merge in needs_merge.iterrows():
-        source_param_key = tuple(row_needs_merge[["MergeInto", "KeyGroup"]])
-        dest_param_key = tuple(row_needs_merge[["ParamGroup", "KeyGroup"]])
+        source_param_key = tuple(row_needs_merge[["MergeInto", "EntitySet"]])
+        dest_param_key = tuple(row_needs_merge[["ParamGroup", "EntitySet"]])
         dest_metadata = row_needs_merge.to_dict()
-        source_row = actions.loc[(actions[["ParamGroup", "KeyGroup"]] == source_param_key).all(1)]
+        source_row = actions.loc[(actions[["ParamGroup", "EntitySet"]] == source_param_key).all(1)]
 
         if source_param_key[0] == 0:
             print("going to delete ", dest_param_key)
@@ -299,10 +299,12 @@ def group_by_acquisition_sets(files_tsv, output_prefix, acq_group_level):
 
         if acq_group_level == "subject":
             acq_id = (file_entities.get("subject"), file_entities.get("session"))
-            acq_groups[acq_id].append((row.KeyGroup, row.ParamGroup))
+            acq_groups[acq_id].append((row.EntitySet, row.ParamGroup))
         else:
             acq_id = (file_entities.get("subject"), None)
-            acq_groups[acq_id].append((row.KeyGroup, row.ParamGroup, file_entities.get("session")))
+            acq_groups[acq_id].append(
+                (row.EntitySet, row.ParamGroup, file_entities.get("session"))
+            )
 
     # Map the contents to a list of subjects/sessions
     contents_to_subjects = defaultdict(list)

cubids/metadata_merge.py

@@ -1,7 +1,7 @@
 Heavily downsampled CS-DSI testing datasets
 
 This data has had some parameters changed so that there are different
-parameter groups in the same key groups.
+parameter groups in the same entity sets.
 
 ## Changes
 

cubids/tests/data/BIDS_Dataset/README

@@ -1,21 +1,21 @@
-KeyParamGroup,KeyGroup,ParamGroup,Counts,Dim1Size,Dim2Size,Dim3Size,EchoTime,EffectiveEchoSpacing,FlipAngle,HasFieldmap,KeyGroupCount,Modality,NSliceTimes,NumVolumes,Obliquity,PartialFourier,PhaseEncodingDirection,RepetitionTime,TotalReadoutTime,UsedAsFieldmap,VoxelSizeDim1,VoxelSizeDim2,VoxelSizeDim3,FilePath
-datatype-anat_suffix-T1w__1,datatype-anat_suffix-T1w,1,3,180,216,180,0.0029,,8.0,FALSE,3,anat,0,1.0,FALSE,,i-,2.5,,FALSE,1.0,1.0,1.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.nii.gz
-datatype-anat_suffix-T1w__1,datatype-anat_suffix-T1w,1,3,180,216,180,0.0029,,8.0,FALSE,3,anat,0,1.0,FALSE,,i-,2.5,,FALSE,1.0,1.0,1.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/anat/sub-02_ses-phdiff_T1w.nii.gz
-datatype-anat_suffix-T1w__1,datatype-anat_suffix-T1w,1,3,180,216,180,0.0029,,8.0,FALSE,3,anat,0,1.0,FALSE,,i-,2.5,,FALSE,1.0,1.0,1.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/anat/sub-03_ses-phdiff_T1w.nii.gz
-acquisition-HASC55AP_datatype-dwi_suffix-dwi__1,acquisition-HASC55AP_datatype-dwi_suffix-dwi,1,1,36,43,36,0.04,0.00069,90.0,TRUE,3,dwi,36,61.0,FALSE,,j,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.nii.gz
-acquisition-HASC55AP_datatype-dwi_suffix-dwi__2,acquisition-HASC55AP_datatype-dwi_suffix-dwi,2,1,36,43,36,0.089,0.00069,,TRUE,3,dwi,36,61.0,FALSE,,j,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.nii.gz
-acquisition-HASC55AP_datatype-dwi_suffix-dwi__3,acquisition-HASC55AP_datatype-dwi_suffix-dwi,3,1,36,43,36,0.089,0.00069,90.0,TRUE,3,dwi,36,61.0,FALSE,,j,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.nii.gz
-acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1__1,acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1,1,3,36,43,36,0.004,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude1.nii.gz
-acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1__1,acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1,1,3,36,43,36,0.004,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude1.nii.gz
-acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1__1,acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1,1,3,36,43,36,0.004,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude1.nii.gz
-acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2__1,acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2,1,3,36,43,36,0.006,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude2.nii.gz
-acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2__1,acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2,1,3,36,43,36,0.006,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude2.nii.gz
-acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2__1,acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2,1,3,36,43,36,0.006,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude2.nii.gz
-acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff__1,acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff,1,3,36,43,36,,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,TRUE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_phasediff.nii.gz
-acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff__1,acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff,1,3,36,43,36,,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,TRUE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_phasediff.nii.gz
-acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff__1,acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff,1,3,36,43,36,,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,TRUE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_phasediff.nii.gz
-datatype-fmap_direction-PA_fmap-epi_suffix-epi__1,datatype-fmap_direction-PA_fmap-epi_suffix-epi,1,2,36,43,36,0.089,0.00069,90.0,FALSE,3,fmap,36,1.0,FALSE,,j-,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_dir-PA_epi.nii.gz
-datatype-fmap_direction-PA_fmap-epi_suffix-epi__1,datatype-fmap_direction-PA_fmap-epi_suffix-epi,1,2,36,43,36,0.089,0.00069,90.0,FALSE,3,fmap,36,1.0,FALSE,,j-,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_dir-PA_epi.nii.gz
-datatype-fmap_direction-PA_fmap-epi_suffix-epi__2,datatype-fmap_direction-PA_fmap-epi_suffix-epi,2,1,36,43,36,0.089,0.00069,90.0,FALSE,3,fmap,36,1.0,FALSE,,j-,4.2,0.072,TRUE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_dir-PA_epi.nii.gz
-datatype-func_suffix-bold_task-rest__1,datatype-func_suffix-bold_task-rest,1,1,36,43,36,0.089,0.00069,90.0,FALSE,2,func,36,61.0,FALSE,,j,1.0,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/func/sub-03_ses-phdiff_task-rest_bold.nii.gz
+KeyParamGroup,EntitySet,ParamGroup,Counts,Dim1Size,Dim2Size,Dim3Size,EchoTime,EffectiveEchoSpacing,FlipAngle,HasFieldmap,EntitySetCount,Modality,NSliceTimes,NumVolumes,Obliquity,PartialFourier,PhaseEncodingDirection,RepetitionTime,TotalReadoutTime,UsedAsFieldmap,VoxelSizeDim1,VoxelSizeDim2,VoxelSizeDim3,FilePath
+datatype-anat_suffix-T1w__1,datatype-anat_suffix-T1w,1,3,180,216,180,0.0029,,8.0,FALSE,3,anat,0,1.0,FALSE,,i-,2.5,,FALSE,1.0,1.0,1.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/anat/sub-01_ses-phdiff_T1w.nii.gz
+datatype-anat_suffix-T1w__1,datatype-anat_suffix-T1w,1,3,180,216,180,0.0029,,8.0,FALSE,3,anat,0,1.0,FALSE,,i-,2.5,,FALSE,1.0,1.0,1.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/anat/sub-02_ses-phdiff_T1w.nii.gz
+datatype-anat_suffix-T1w__1,datatype-anat_suffix-T1w,1,3,180,216,180,0.0029,,8.0,FALSE,3,anat,0,1.0,FALSE,,i-,2.5,,FALSE,1.0,1.0,1.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/anat/sub-03_ses-phdiff_T1w.nii.gz
+acquisition-HASC55AP_datatype-dwi_suffix-dwi__1,acquisition-HASC55AP_datatype-dwi_suffix-dwi,1,1,36,43,36,0.04,0.00069,90.0,TRUE,3,dwi,36,61.0,FALSE,,j,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/dwi/sub-01_ses-phdiff_acq-HASC55AP_dwi.nii.gz
+acquisition-HASC55AP_datatype-dwi_suffix-dwi__2,acquisition-HASC55AP_datatype-dwi_suffix-dwi,2,1,36,43,36,0.089,0.00069,,TRUE,3,dwi,36,61.0,FALSE,,j,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/dwi/sub-02_ses-phdiff_acq-HASC55AP_dwi.nii.gz
+acquisition-HASC55AP_datatype-dwi_suffix-dwi__3,acquisition-HASC55AP_datatype-dwi_suffix-dwi,3,1,36,43,36,0.089,0.00069,90.0,TRUE,3,dwi,36,61.0,FALSE,,j,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/dwi/sub-03_ses-phdiff_acq-HASC55AP_dwi.nii.gz
+acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1__1,acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1,1,3,36,43,36,0.004,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude1.nii.gz
+acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1__1,acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1,1,3,36,43,36,0.004,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude1.nii.gz
+acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1__1,acquisition-v4_datatype-fmap_fmap-magnitude1_suffix-magnitude1,1,3,36,43,36,0.004,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude1.nii.gz
+acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2__1,acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2,1,3,36,43,36,0.006,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_magnitude2.nii.gz
+acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2__1,acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2,1,3,36,43,36,0.006,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_magnitude2.nii.gz
+acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2__1,acquisition-v4_datatype-fmap_fmap-magnitude2_suffix-magnitude2,1,3,36,43,36,0.006,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_magnitude2.nii.gz
+acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff__1,acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff,1,3,36,43,36,,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,TRUE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_acq-v4_phasediff.nii.gz
+acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff__1,acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff,1,3,36,43,36,,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,TRUE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_acq-v4_phasediff.nii.gz
+acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff__1,acquisition-v4_datatype-fmap_fmap-phasediff_suffix-phasediff,1,3,36,43,36,,,60.0,FALSE,3,fmap,0,1.0,FALSE,0.75,j-,1.5,,TRUE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_acq-v4_phasediff.nii.gz
+datatype-fmap_direction-PA_fmap-epi_suffix-epi__1,datatype-fmap_direction-PA_fmap-epi_suffix-epi,1,2,36,43,36,0.089,0.00069,90.0,FALSE,3,fmap,36,1.0,FALSE,,j-,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/fmap/sub-01_ses-phdiff_dir-PA_epi.nii.gz
+datatype-fmap_direction-PA_fmap-epi_suffix-epi__1,datatype-fmap_direction-PA_fmap-epi_suffix-epi,1,2,36,43,36,0.089,0.00069,90.0,FALSE,3,fmap,36,1.0,FALSE,,j-,4.2,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-02/ses-phdiff/fmap/sub-02_ses-phdiff_dir-PA_epi.nii.gz
+datatype-fmap_direction-PA_fmap-epi_suffix-epi__2,datatype-fmap_direction-PA_fmap-epi_suffix-epi,2,1,36,43,36,0.089,0.00069,90.0,FALSE,3,fmap,36,1.0,FALSE,,j-,4.2,0.072,TRUE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/fmap/sub-03_ses-phdiff_dir-PA_epi.nii.gz
+datatype-func_suffix-bold_task-rest__1,datatype-func_suffix-bold_task-rest,1,1,36,43,36,0.089,0.00069,90.0,FALSE,2,func,36,61.0,FALSE,,j,1.0,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-03/ses-phdiff/func/sub-03_ses-phdiff_task-rest_bold.nii.gz
 datatype-func_suffix-bold_task-rest__2,datatype-func_suffix-bold_task-rest,2,1,36,43,36,0.089,0.00069,90.0,TRUE,2,func,36,10.0,FALSE,,j,1.0,0.072,FALSE,5.0,5.0,5.0,/Users/scovitz/BIDS_Dataset_Datalad/sub-01/ses-phdiff/func/sub-01_ses-phdiff_task-rest_bold.nii.gz