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‎docs/outputs.rst‎

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@@ -175,9 +175,9 @@ atlases it uses to parcellate the functional outputs.
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xcp_d/
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sub-<label>/[ses-<label>/]
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anat/
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<source_entities>_space-fsLR_seg-<label>_stat-mean_desc-curv_morph.tsv
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<source_entities>_space-fsLR_seg-<label>_stat-mean_desc-sulc_morph.tsv
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<source_entities>_space-fsLR_seg-<label>_stat-mean_desc-thickness_morph.tsv
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<source_entities>_space-fsLR_atlas-<label>_stat-mean_desc-curv_morph.tsv
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<source_entities>_space-fsLR_atlas-<label>_stat-mean_desc-sulc_morph.tsv
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<source_entities>_space-fsLR_atlas-<label>_stat-mean_desc-thickness_morph.tsv
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******************
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sub-<label>/[ses-<label>/]
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func/
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# NIfTI
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<source_entities>_space-<label>_seg-<label>_stat-coverage_bold.tsv
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<source_entities>_space-<label>_seg-<label>_stat-mean_timeseries.tsv
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<source_entities>_space-<label>_seg-<label>_stat-pearsoncorrelation_relmat.tsv
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<source_entities>_space-<label>_seg-<label>_stat-pearsoncorrelation_desc-<INT>volumes_relmat.tsv
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<source_entities>_space-<label>_atlas-<label>_stat-coverage_bold.tsv
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<source_entities>_space-<label>_atlas-<label>_stat-mean_timeseries.tsv
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<source_entities>_space-<label>_atlas-<label>_stat-pearsoncorrelation_relmat.tsv
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<source_entities>_space-<label>_atlas-<label>_stat-pearsoncorrelation_desc-<INT>volumes_relmat.tsv
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# CIFTI
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<source_entities>_space-fsLR_seg-<label>_den-91k_stat-coverage_bold.tsv
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<source_entities>_space-fsLR_seg-<label>_den-91k_stat-coverage_boldmap.pscalar.nii
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<source_entities>_space-fsLR_seg-<label>_den-91k_stat-mean_timeseries.tsv
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<source_entities>_space-fsLR_seg-<label>_den-91k_stat-mean_timeseries.ptseries.nii
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<source_entities>_space-fsLR_seg-<label>_den-91k_stat-pearsoncorrelation_relmat.tsv
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<source_entities>_space-fsLR_seg-<label>_den-91k_stat-pearsoncorrelation_boldmap.pconn.nii
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<source_entities>_space-fsLR_seg-<label>_den-91k_stat-pearsoncorrelation_desc-<INT>volumes_relmat.tsv
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<source_entities>_space-fsLR_atlas-<label>_den-91k_stat-coverage_bold.tsv
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<source_entities>_space-fsLR_atlas-<label>_den-91k_stat-coverage_boldmap.pscalar.nii
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<source_entities>_space-fsLR_atlas-<label>_den-91k_stat-mean_timeseries.tsv
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<source_entities>_space-fsLR_atlas-<label>_den-91k_stat-mean_timeseries.ptseries.nii
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<source_entities>_space-fsLR_atlas-<label>_den-91k_stat-pearsoncorrelation_relmat.tsv
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<source_entities>_space-fsLR_atlas-<label>_den-91k_stat-pearsoncorrelation_boldmap.pconn.nii
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<source_entities>_space-fsLR_atlas-<label>_den-91k_stat-pearsoncorrelation_desc-<INT>volumes_relmat.tsv
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Resting-state metric derivatives (ReHo and ALFF)
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<source_entities>_space-<label>_stat-reho_boldmap.nii.gz
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<source_entities>_space-<label>_stat-alff_boldmap.nii.gz
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<source_entities>_space-<label>_stat-alff_desc-smooth_boldmap.nii.gz
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<source_entities>_space-<label>_seg-<label>_stat-alff_bold.tsv
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<source_entities>_space-<label>_seg-<label>_stat-reho_bold.tsv
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<source_entities>_space-<label>_atlas-<label>_stat-alff_bold.tsv
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<source_entities>_space-<label>_atlas-<label>_stat-reho_bold.tsv
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# CIFTI
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<source_entities>_space-fsLR_den-91k_stat-reho_boldmap.dscalar.nii
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<source_entities>_space-fsLR_den-91k_stat-alff_boldmap.dscalar.nii
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<source_entities>_space-fsLR_den-91k_stat-alff_desc-smooth_boldmap.dscalar.nii
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<source_entities>_space-fsLR_seg-<label>_stat-alff_bold.tsv
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<source_entities>_space-fsLR_seg-<label>_stat-reho_bold.tsv
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<source_entities>_space-fsLR_atlas-<label>_stat-alff_bold.tsv
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<source_entities>_space-fsLR_atlas-<label>_stat-reho_bold.tsv
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Other outputs include quality control, framewise displacement, and confounds files

‎xcp_d/tests/data/test_ds001419_cifti_outputs.txt‎

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‎xcp_d/tests/data/test_ds001419_cifti_with_skip_outputs.txt‎

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‎xcp_d/tests/data/test_fmriprep_without_freesurfer_outputs.txt‎

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