Merge pull request #207 from PhysiCell-Tools/development

Development

Author: rheiland

VERSION.txt

@@ -1 +1 @@
-2.37.3
+2.37.4

bin/cell_def_tab.py

@@ -6752,7 +6752,7 @@ def add_new_substrate(self, sub_name):  # called for both "New" and "Copy" of su
             # initialize secretion params
             self.param_d[cdname]["secretion"][sub_name] = {}
             self.param_d[cdname]["secretion"][sub_name]["secretion_rate"] = sval
-            self.param_d[cdname]["secretion"][sub_name]["secretion_target"] = sval
+            self.param_d[cdname]["secretion"][sub_name]["secretion_target"] = 1.0
             self.param_d[cdname]["secretion"][sub_name]["uptake_rate"] = sval
             self.param_d[cdname]["secretion"][sub_name]["net_export_rate"] = sval
 

bin/studio.py

@@ -752,7 +752,18 @@ def save_as_cb(self):
             print("len(full_path_model_name) = ", len(full_path_model_name) )
             # self.current_save_file = full_path_model_name
             orig_file_name = self.current_xml_file
-            self.current_xml_file = full_path_model_name
+            self.current_xml_file =full_path_model_name 
+
+            # print("full_path_model_name[-4:]= ",full_path_model_name[-4:] )
+            if full_path_model_name[-4:] != ".xml":
+                print("missing .xml suffix")
+                msgBox = QMessageBox()
+                msgBox.setIcon(QMessageBox.Information)
+                msgBox.setText("Missing a .xml suffix. Continue?")
+                msgBox.setStandardButtons(QMessageBox.Ok | QMessageBox.Cancel)
+                returnValue = msgBox.exec()
+                if returnValue == QMessageBox.Cancel:
+                    return
         else:
             return