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README.md

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@@ -10,6 +10,8 @@ DeepSlice requires no preprocessing and works on any stain, however we have foun
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At present one limitation is that it only works on Coronally cut sections, we will release an update in the future for sagittal and horizontally cut histology.
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![Alt](docs/images/process.PNG)
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DeepSlice automates the process of identifying exactly where in the brain a section lies, it can accomodate non-orthogonal cutting planes and will produce an image specific annotation for each section in your brain.
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## Citation
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If you use DeepSlice in your work please cite [Carey et al, 2023](https://www.nature.com/articles/s41467-023-41645-4). It may also be useful if you mention the version you use :)
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## Workflow
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DeepSlice is fully integrated with the <a href="https://quint-workflow.readthedocs.io/en/latest/QUINTintro.html" >QUINT workflow.</a> Quint helps you register, segment and quantify brain wide datasets! &nbsp; 🐭🧠🔬💻🤖

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