Merge pull request #20 from projectpythia-mystmd/main

MySTify

Author: r-ford

.github/workflows/nightly-build.yaml

@@ -10,8 +10,13 @@ jobs:
     if: ${{ github.repository_owner == 'ProjectPythia' }}
     uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
     with:
-      environment_name: cookbook-dev
+      build_command: 'myst build --execute --html'
 
-  link-check:
-    if: ${{ github.repository_owner == 'ProjectPythia' }}
-    uses: ProjectPythia/cookbook-actions/.github/workflows/link-checker.yaml@main
+  deploy:
+    needs: build
+    uses: ProjectPythia/cookbook-actions/.github/workflows/deploy-book.yaml@main
+
+#   We don't have a link-checker with MyST right now
+#   link-check:
+#     if: ${{ github.repository_owner == 'ProjectPythia' }}
+#     uses: ProjectPythia/cookbook-actions/.github/workflows/link-checker.yaml@main

.github/workflows/publish-book.yaml

@@ -11,8 +11,9 @@ jobs:
   build:
     uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
     with:
-      environment_name: cookbook-dev
+      build_command: 'myst build --execute --html'
+
 
   deploy:
     needs: build
-    uses: ProjectPythia/cookbook-actions/.github/workflows/deploy-book.yaml@main
+    uses: ProjectPythia/cookbook-actions/.github/workflows/deploy-book.yaml@main

.github/workflows/replace-links.yaml

@@ -0,0 +1,31 @@
+name: replace-links
+
+on:
+  workflow_dispatch:
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+
+    steps:
+      - uses: actions/checkout@v4
+      - name: Find and Replace Repository Name
+        uses: jacobtomlinson/gha-find-replace@v3
+        with:
+          find: "ProjectPythia/cookbook-template"
+          replace: "${{ github.repository_owner }}/${{ github.event.repository.name }}"
+          regex: false
+          exclude: ".github/workflows/replace-links.yaml"
+
+      - name: Find and Replace Repository ID
+        uses: jacobtomlinson/gha-find-replace@v3
+        with:
+          find: "475509405"
+          replace: "${{ github.repository_id}}"
+          regex: false
+          exclude: ".github/workflows/replace-links.yaml"
+
+      - name: Push changes
+        uses: stefanzweifel/git-auto-commit-action@v5

.github/workflows/trigger-book-build.yaml

@@ -6,6 +6,7 @@ jobs:
   build:
     uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
     with:
-      environment_name: cookbook-dev
+      build_command: 'myst build --execute --html'
       artifact_name: book-zip-${{ github.event.number }}
-      # Other input options are possible, see ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml
+      base_url: '/${{ github.event.repository.name }}/_preview/${{ github.event.number }}'
+      # Other input options are possible, see ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml

.github/workflows/trigger-delete-preview.yaml

@@ -6,4 +6,4 @@ on:
 
 jobs:
   delete:
-    uses: ProjectPythia/cookbook-actions/.github/workflows/delete-preview.yaml@main
+    uses: ProjectPythia/cookbook-actions/.github/workflows/delete-preview.yaml@main

.github/workflows/trigger-link-check.yaml

@@ -24,4 +24,4 @@ jobs:
     uses: ProjectPythia/cookbook-actions/.github/workflows/preview-comment.yaml@main
     with:
       pull_request_number: ${{ needs.find-pull-request.outputs.number }}
-      sha: ${{ needs.find-pull-request.outputs.sha }}
+      sha: ${{ needs.find-pull-request.outputs.sha }}

.github/workflows/trigger-preview.yaml

@@ -3,9 +3,8 @@ channels:
   - conda-forge
 dependencies:
   - python
-  - jupyter-book
-  - jupyterlab
   - jupyter_server
+  - ipykernel
   - numpy
   - xarray
   - matplotlib
@@ -18,6 +17,6 @@ dependencies:
   - fsspec
   - nc-time-axis
   - gcsfs
+  - mystmd
   - cftime
   - pydap
-  - sphinx-pythia-theme