Merge pull request #2841 from mrmundt/finalize-release

Finalize Pyomo for 6.6.0 Release

Author: mrmundt

.coin-or/projDesc.xml

@@ -227,8 +227,8 @@ Carl D. Laird, Chair, Pyomo Management Committee, claird at andrew dot cmu dot e
 			     Use explicit overrides to disable use of automated
 			     version reporting.
 			-->
-			<stableVersionNumber>6.5.0</stableVersionNumber>
-			<releaseNumber>6.5.0</releaseNumber>
+			<stableVersionNumber>6.6.0</stableVersionNumber>
+			<releaseNumber>6.6.0</releaseNumber>
 
 		</developmentStatus>
 

CHANGELOG.md

@@ -1,6 +1,60 @@
 Pyomo CHANGELOG
 ===============
 
+-------------------------------------------------------------------------------
+Pyomo 6.6.0    (24 May 2023)
+-------------------------------------------------------------------------------
+
+- General
+  - Remove `pyomo check`/`pyomo.checker` module (#2753)
+  - Improve formatting of docstrings generated from `ConfigDict` (#2754)
+  - Deprecate `add_docstring_list` (#2755)
+  - Reapply `black` to previously completed directories (#2775)
+  - Improve formatting for `DeveloperError`, `MouseTrap` messages (#2805)
+- Core
+  - Bugfix: component indexes specified as lists (#2765)
+  - Remove the use of weakrefs in `SymbolMap` (#2791)
+  - Improve conversions between Pyomo and Sympy expressions (#2806)
+  - Rework expression generation to leverage multiple dispatch (#2722)
+  - Improve robustness of `calculate_variable_from_constraint()` (#2812)
+  - Add support for infix Boolean logical operators (#2835)
+  - Improvements to Pyomo component iteration (#2829)
+- Documentation
+  - Copyright and Book Updates (#2750)
+  - Link documentation in incidence_analysis README (#2759)
+  - Update ReadtheDocs Configuration (#2780)
+  - Correct import in community.rst (#2792)
+  - Remove instructions for python <= 3.0 (#2822)
+- Solvers Interfaces
+  - NEOS: fix typo in `kestrelAMPL.kill()` argument (#2758)
+  - Better handling of mutable parameters in HiGHS interface (#2763)
+  - Improve linear data structure in NL writer (#2769)
+  - Bugfix for shared named expressions in NL writer (#2790)
+  - Resolve NPV constants in `LinearExpressions` in NL writer (#2811)
+  - GAMS/Baron: ensure negative numbers are parenthesized (#2833)
+  - Release LP version 2 (LPv2) writer (#2823, #2840)
+- Testing
+  - Rework Upload of Coverage Reports (#2761)
+  - Update constant for visitor tests for python 3.11.2 (#2799)
+  - Auto-Linting: Spelling Black Style Checker (#2800, #2818)
+  - Skip MOSEK tests on NEOS (due to unknown NEOS error) (#2839)
+- GDP
+  - Add `gdp.bound_pretransformation` (#2824)
+- Contributed Packages
+  - APPSI: Improve logging consistency across solvers (#2787)
+  - APPSI: Update `available` method in APPSI-Gurobi interface (#2828)
+  - DoE: Release version 2 (#2794)
+  - incidence_analysis: Remove strict usage of PyomoNLP (#2752)
+  - incidence_analysis: Test `IndexedBlock` (#2789)
+  - incidence_analysis: Use standard repn for incidence graph generation (#2834)
+  - Parmest: Update for pandas 2.0.0 release (#2795)
+  - piecewise: Add contrib.piecewise package (#2708, #2768, #2766, #2797, #2798,
+    #2826)
+  - PyNumero: Refactor CyIpopt interface to subclass `cyipopt.Problem` (#2760)
+  - PyNumero: Fix CyIpopt interface when `load_solutions=False` (#2820)
+  - PyROS: Fixes to PyROS Separation Routine (#2815)
+  - PyROS: Fixes to Coefficient Matching and Timing Functionalities (#2837)
+
 -------------------------------------------------------------------------------
 Pyomo 6.5.0    (16 Feb 2023)
 -------------------------------------------------------------------------------

RELEASE.md

@@ -1,4 +1,4 @@
-We are pleased to announce the release of Pyomo 6.5.0.
+We are pleased to announce the release of Pyomo 6.6.0.
 
 Pyomo is a collection of Python software packages that supports a
 diverse set of optimization capabilities for formulating and analyzing
@@ -9,16 +9,23 @@ The following are highlights of the 6.0 release series:
  - Improved stability and robustness of core Pyomo code and solver interfaces
  - Integration of Boolean variables into GDP
  - Integration of NumPy support into the Pyomo expression system
+ - Implemented a more performant and robust expression generation system
  - Implemented a more performant NL file writer (NLv2)
+ - Implemented a more performant LP file writer (LPv2)
+ - Applied [PEP8 standards](https://peps.python.org/pep-0008/) throughout the
+   codebase
  - Added support for Python 3.10, 3.11
  - Removed support for Python 3.6
+ - Removed the `pyomo check` command
  - New packages:
     - APPSI (Auto-Persistent Pyomo Solver Interfaces)
     - CP (Constraint programming models and solver interfaces)
     - DoE (Model based design of experiments)
     - External grey box models
     - IIS (Standard interface to solver IIS capabilities)
     - MPC (Data structures/utils for rolling horizon dynamic optimization)
+    - piecewise (Modeling with and reformulating multivariate piecewise linear
+      functions)
     - PyROS (Pyomo Robust Optimization Solver)
     - Structural model analysis
     - Rewrite of the TrustRegion Solver

pyomo/common/config.py

@@ -1443,7 +1443,7 @@ def _finalize(self):
 @deprecated(
     "add_docstring_list is deprecated.  Please use the "
     "@document_kwargs_from_configdict() decorator.",
-    version='6.5.1.dev0',
+    version='6.6.0',
 )
 def add_docstring_list(docstring, configdict, indent_by=4):
     """Returns the docstring with a formatted configuration arguments listing."""
@@ -2010,7 +2010,7 @@ def generate_documentation(
                     f"Overriding '{name}' by passing strings to "
                     "generate_documentation is deprecated.  Create an instance of a "
                     "StringConfigFormatter and pass it as the 'format' argument.",
-                    version='6.5.1.dev0',
+                    version='6.6.0',
                 )
                 setattr(
                     formatter, "_" + name, _formatter_str_to_callback(arg, formatter)
@@ -2020,7 +2020,7 @@ def generate_documentation(
                 f"Overriding 'item_body' by passing strings to "
                 "generate_documentation is deprecated.  Create an instance of a "
                 "StringConfigFormatter and pass it as the 'format' argument.",
-                version='6.5.1.dev0',
+                version='6.6.0',
             )
             setattr(
                 formatter,

pyomo/common/numeric_types.py

@@ -44,7 +44,7 @@
 relocated_module_attribute(
     'native_boolean_types',
     'pyomo.common.numeric_types._native_boolean_types',
-    version='6.5.1.dev0',
+    version='6.6.0',
     msg="The native_boolean_types set will be removed in the future: the set "
     "contains types that were convertible to bool, and not types that should "
     "be treated as if they were bool (as was the case for the other "
@@ -96,7 +96,7 @@ def RegisterIntegerType(new_type):
 @deprecated(
     "The native_boolean_types set (and hence RegisterBooleanType) "
     "is deprecated.  Users likely should use RegisterLogicalType.",
-    version='6.5.1.dev0',
+    version='6.6.0',
 )
 def RegisterBooleanType(new_type):
     """

pyomo/contrib/pynumero/algorithms/solvers/cyipopt_solver.py

@@ -47,17 +47,17 @@
 relocated_module_attribute(
     "cyipopt_available",
     "pyomo.contrib.pynumero.interfaces.cyipopt_interface.cyipopt_available",
-    "6.5.1.dev0",
+    "6.6.0",
 )
 relocated_module_attribute(
     "CyIpoptProblemInterface",
     "pyomo.contrib.pynumero.interfaces.cyipopt_interface.CyIpoptProblemInterface",
-    "6.5.1.dev0",
+    "6.6.0",
 )
 relocated_module_attribute(
     "CyIpoptNLP",
     "pyomo.contrib.pynumero.interfaces.cyipopt_interface.CyIpoptNLP",
-    "6.5.1.dev0",
+    "6.6.0",
 )
 
 from pyomo.common.config import ConfigBlock, ConfigValue

pyomo/contrib/pynumero/interfaces/ampl_nlp.py

@@ -773,7 +773,7 @@ def primals_names(self):
 
     @deprecated(
         msg='This method has been replaced with primals_names',
-        version='6.0.0.dev0',
+        version='6.0.0',
         remove_in='6.0',
     )
     def variable_names(self):
@@ -797,7 +797,7 @@ def ineq_constraint_names(self):
 
     @deprecated(
         msg='This method has been replaced with primal_idx',
-        version='6.0.0.dev0',
+        version='6.0.0',
         remove_in='6.0',
     )
     def variable_idx(self, var_name):

pyomo/contrib/pynumero/interfaces/pyomo_nlp.py

@@ -1,4 +1,3 @@
-#  ___________________________________________________________________________
 #
 #  Pyomo: Python Optimization Modeling Objects
 #  Copyright (c) 2008-2022
@@ -185,7 +184,7 @@ def get_pyomo_inequality_constraints(self):
 
     @deprecated(
         msg='This method has been replaced with primals_names',
-        version='6.0.0.dev0',
+        version='6.0.0',
         remove_in='6.0',
     )
     def variable_names(self):
@@ -1109,7 +1108,7 @@ def report_solver_status(self, status_code, status_message):
 
     @deprecated(
         msg='This method has been replaced with primals_names',
-        version='6.0.0.dev0',
+        version='6.0.0',
         remove_in='6.0',
     )
     def variable_names(self):

pyomo/core/base/block.py

@@ -1613,7 +1613,7 @@ def component_data_objects(
         "The component_data_iterindex method is deprecated.  "
         "Components now know their index, so it is more efficient to use the "
         "Block.component_data_objects() method followed by .index().",
-        version="6.5.1.dev0",
+        version="6.6.0",
     )
     def component_data_iterindex(
         self, ctype=None, active=None, sort=False, descend_into=True, descent_order=None

pyomo/core/base/indexed_component.py

@@ -438,7 +438,7 @@ def keys(self, sort=SortComponents.UNSORTED, ordered=NOTSET):
             deprecation_warning(
                 f"keys(ordered={ordered}) is deprecated.  "
                 "Please use `sort=SortComponents.ORDERED_INDICES`",
-                version='6.5.1.dev0',
+                version='6.6.0',
             )
             if ordered:
                 sort = sort | SortComponents.ORDERED_INDICES
@@ -529,7 +529,7 @@ def values(self, sort=SortComponents.UNSORTED, ordered=NOTSET):
             deprecation_warning(
                 f"values(ordered={ordered}) is deprecated.  "
                 "Please use `sort=SortComponents.ORDERED_INDICES`",
-                version='6.5.1.dev0',
+                version='6.6.0',
             )
             if ordered:
                 sort = SortComponents(sort) | SortComponents.ORDERED_INDICES
@@ -564,7 +564,7 @@ def items(self, sort=SortComponents.UNSORTED, ordered=NOTSET):
             deprecation_warning(
                 f"items(ordered={ordered}) is deprecated.  "
                 "Please use `sort=SortComponents.ORDERED_INDICES`",
-                version='6.5.1.dev0',
+                version='6.6.0',
             )
             if ordered:
                 sort = SortComponents(sort) | SortComponents.ORDERED_INDICES

pyomo/core/expr/numeric_expr.py

@@ -696,7 +696,7 @@ def _to_string(self, values, verbose, smap):
     @deprecated(
         "SumExpression.add() is deprecated.  Please use regular Python operators "
         "(infix '+' or inplace '+='.)",
-        version='6.5.1.dev0',
+        version='6.6.0',
     )
     def add(self, new_arg):
         self += new_arg

pyomo/core/expr/numvalue.py

@@ -75,7 +75,7 @@
 relocated_module_attribute(
     'native_boolean_types',
     'pyomo.common.numeric_types._native_boolean_types',
-    version='6.5.1.dev0',
+    version='6.6.0',
     f_globals=globals(),
     msg="The native_boolean_types set will be removed in the future: the set "
     "contains types that were convertible to bool, and not types that should "
@@ -85,19 +85,19 @@
 relocated_module_attribute(
     'RegisterNumericType',
     'pyomo.common.numeric_types.RegisterNumericType',
-    version='6.5.1.dev0',
+    version='6.6.0',
     f_globals=globals(),
 )
 relocated_module_attribute(
     'RegisterIntegerType',
     'pyomo.common.numeric_types.RegisterIntegerType',
-    version='6.5.1.dev0',
+    version='6.6.0',
     f_globals=globals(),
 )
 relocated_module_attribute(
     'RegisterBooleanType',
     'pyomo.common.numeric_types.RegisterBooleanType',
-    version='6.5.1.dev0',
+    version='6.6.0',
     f_globals=globals(),
 )
 

pyomo/core/util.py

@@ -94,7 +94,7 @@ def quicksum(args, start=0, linear=None):
     if linear is not None:
         deprecation_warning(
             "The quicksum(linear=...) argument is deprecated and ignored.",
-            version='6.5.1.dev0',
+            version='6.6.0',
         )
 
     #

pyomo/repn/linear.py

@@ -220,7 +220,7 @@ def _handle_product_constant_constant(visitor, node, arg1, arg2):
                 "Mapping the NaN result to 0 for compatibility "
                 "with the lp_v1 writer.  In the future, this NaN "
                 "will be preserved/emitted to comply with IEEE-754.",
-                version='6.5.1.dev0',
+                version='6.6.0',
             )
             return _, 0
     return _, arg1 * arg2
@@ -628,7 +628,7 @@ def _before_monomial(visitor, child):
                 "Mapping the NaN result to 0 for compatibility "
                 "with the lp_v1 writer.  In the future, this NaN "
                 "will be preserved/emitted to comply with IEEE-754.",
-                version='6.5.1.dev0',
+                version='6.6.0',
             )
         return False, (_CONSTANT, arg1)
 
@@ -669,7 +669,7 @@ def _before_linear(visitor, child):
                         "Mapping the NaN result to 0 for compatibility "
                         "with the lp_v1 writer.  In the future, this NaN "
                         "will be preserved/emitted to comply with IEEE-754.",
-                        version='6.5.1.dev0',
+                        version='6.6.0',
                     )
                 continue
             _id = id(arg2)
@@ -914,7 +914,7 @@ def finalizeResult(self, result):
                         "Mapping the NaN result to 0 for compatibility "
                         "with the lp_v1 writer.  In the future, this NaN "
                         "will be preserved/emitted to comply with IEEE-754.",
-                        version='6.5.1.dev0',
+                        version='6.6.0',
                     )
                 return self.Result()
             else:

pyomo/repn/tests/ampl/nl_diff.py

@@ -11,4 +11,4 @@
 
 from pyomo.common.deprecation import relocated_module
 
-relocated_module('pyomo.repn.tests.nl_diff', version='6.5.0.dev0', remove_in='6.5.1')
+relocated_module('pyomo.repn.tests.nl_diff', version='6.6.0', remove_in='6.6.1')

pyomo/version/info.py

@@ -25,10 +25,10 @@
 # should generally be left at 0, unless a downstream package is tracking
 # main and needs a hard reference to "suitably new" development.
 major = 6
-minor = 5
-micro = 1
-releaselevel = 'invalid'
-# releaselevel='final'
+minor = 6
+micro = 0
+# releaselevel = 'invalid'
+releaselevel='final'
 serial = 0
 
 if releaselevel == 'final':