MindtPy rewrite TODO list

[ZedongPeng]

Summary

This issue summarizes the TODO list left in MindtPy rewrite #2654 .

Description

• Check and improve the var_list generation in MindtPy. Mindtpy rewrite #2654 (comment)
• Decide whether to remove feasible_no_good_cuts. Mindtpy rewrite #2654 (comment)
• Hard-coded value of zero_tolerance. Mindtpy rewrite #2654 (comment)
• Redesign the config check in MindtPy. Mindtpy rewrite #2654 (comment)
• Use StaleFlagManager. Mindtpy rewrite #2654 (comment)
• Deal with two-sided inequalities. Mindtpy rewrite #2654 (comment)
• Improve the single-tree implementation, especially the solve_data design. Mindtpy rewrite #2654 (comment)
• Support for external function calls in NLP subproblems
• https://github.com/Pyomo/pyomo/pull/2654/files/3d01126274de3e3a5beb48d22464083fe6a8fccd#r1054850485
• https://github.com/Pyomo/pyomo/pull/2654/files/3d01126274de3e3a5beb48d22464083fe6a8fccd#r1054854281
• Mindtpy rewrite #2654 (comment)
• Mindtpy rewrite #2654 (comment)
• Fix docstring Mindtpy rewrite #2654 (comment)
• Use standard Pyomo log handler Mindtpy rewrite #2654 (comment)
• Use of setattr Mindtpy rewrite #2654 (comment)
• Dual sign convention Mindtpy rewrite #2654 (comment)
• LoadSolutions
• warmstart
• Change default MIP solver from GLPK to something else?

[bernalde]

I will add to this list

• Support for external function calls in NLP subproblems

[bernalde]

I'm also adding links to the relevant comments in previous PRs.

• https://github.com/Pyomo/pyomo/pull/2654/files/3d01126274de3e3a5beb48d22464083fe6a8fccd#r1054850485
• https://github.com/Pyomo/pyomo/pull/2654/files/3d01126274de3e3a5beb48d22464083fe6a8fccd#r1054854281
• Mindtpy rewrite #2654 (comment)
• Mindtpy rewrite #2654 (comment)

[blnicho]

Comments from @jsiirola's review

• Fix docstring Mindtpy rewrite #2654 (comment)
• Use standard Pyomo log handler Mindtpy rewrite #2654 (comment)
• Use of setattr Mindtpy rewrite #2654 (comment)
• Dual sign convention Mindtpy rewrite #2654 (comment)

[bernalde]

It should also deal with options:

• LoadSolutions
• warmstart
• Change default MIP solver from GLPK to something else?