IntroToR/_quarto.yml at main · QLS-MiCM/IntroToR · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
project:
  type: website
  render:
    - "*.qmd"           # Render all standard Quarto files
    - "!Exercises/"     # Do NOT render anything in the Exercises folder

website:
  page-navigation: true
  title: "Intro To R"
  site-url: "https://QLS-MiCM.github.io/IntroToR/"
  repo-url: "https://github.com/QLS-MiCM/IntroToR"
  repo-actions: [edit, issue]

  page-footer:
    left: "&copy; CC-By McGill QLS-MiCM, 2026. All rights reserved."
    right: "This page is built with [Quarto](https://quarto.org/)."
    center: "Workshop created as part of the McGill Initiative in Computational Medicine."

  sidebar:
    logo: "images/MiCM_logo.png"
    pinned: true
    align: center
    tools:
      - icon: globe
        href: https://www.mcgill.ca/micm/
        text: "GLS-MiCM"
      - icon: github
        href: https://github.com/QLS-MiCM
        text: "MiCM Github"
      - icon: github
        href: https://github.com/MartinaHYang/IntroToR
        text: "IntroToR Codes"
    style: "docked"
    search: true
    collapse-level: 2
    contents:
      - text: "Welcome🎉"
        href: index.qmd
      - text: "QLS-MiCM"
        href: WebsiteCodes/QLS_MiCM.qmd
      - text: "Why R for Data Science?"
        href: WebsiteCodes/WhyR.qmd
      - text: "Installing R and RStudio"
        href: WebsiteCodes/Setup.qmd
      - text: "Get Acquainted with R and RStudio"
        href: WebsiteCodes/RStudio.qmd
      - text: "How to Use This Materials"
        href: WebsiteCodes/MaterialsInstructions.qmd
      - section: "𝐑 𝐁𝐀𝐒𝐈𝐂𝐒: Data Types and Data Structures"
        contents:
          - text: "Overview"
            href: WebsiteCodes/Overview.qmd
          - text: "𝟭 Atomic Classes (Data Types)"
            href: WebsiteCodes/01AtomicClasses.qmd
          - text: "𝟮 Arithmetic operators"
            href: WebsiteCodes/02ArithmeticOp.qmd
          - text: "𝟯 Syntax operators"
            href: WebsiteCodes/03SyntaxOp.qmd
          - text: "𝟰 Logical operators"
            href: WebsiteCodes/04LogicalOp.qmd
          - text: "𝟱 Objects (Data Structures)"
            href: WebsiteCodes/05Objects.qmd
      - text: "🎃ＥＸＥＲＣＩＳＥ＃１"
        href: WebsiteCodes/Exercise1.qmd
      - text: "👍ＳＯＬＵＴＩＯＮＳ＃１"
        href: WebsiteCodes/Solutions1.qmd
      - section: "𝐑 𝐁𝐀𝐒𝐈𝐂𝐒: Control Structures and Functions"
        contents:
          - text: "Overview"
            href: WebsiteCodes/Overview2.qmd
          - text: "𝟲 Conditional Statements"
            href: WebsiteCodes/06ConditionalStat.qmd
          - text: "𝟳 For Loop/While Loop"
            href: WebsiteCodes/07Loop.qmd
          - text: "𝟴 Create New Functions"
            href: WebsiteCodes/08NewFunctions.qmd
          - text: "𝟵 Installing New Packages"
            href: WebsiteCodes/09Packages.qmd
      - section: "𝐑 𝐁𝐀𝐒𝐈𝐂𝐒: Data Manipulation"
        contents:
          - text: "Overview"
            href: WebsiteCodes/Overview3.qmd
          - text: "𝟭𝟬 Reading/Writing Data"
            href: WebsiteCodes/10RWData.qmd
          - text: "𝟭𝟭 Exploring Data Frames"
            href: WebsiteCodes/11AdvDataFrames.qmd
          - text: "𝟭𝟮	Advanced Data Manipulation"
            href: WebsiteCodes/12Packages4Data.qmd
      - text: "🎃ＥＸＥＲＣＩＳＥ＃２"
        href: WebsiteCodes/Exercise2.qmd
      - text: "👍ＳＯＬＵＴＩＯＮＳ＃２"
        href: WebsiteCodes/Solutions2.qmd
      - text: "🎃ＥＸＥＲＣＩＳＥ＃３"
        href: WebsiteCodes/Exercise3.qmd
      - text: "👍ＳＯＬＵＴＩＯＮＳ＃３"
        href: WebsiteCodes/Solutions3.qmd
      - section: "𝐑 𝐁𝐀𝐒𝐈𝐂𝐒: Generating Visual Outputs"
        contents:
          - text: "Overview"
            href: WebsiteCodes/Overview4.qmd
          - text: "𝟭𝟯 Graphics"
            href: WebsiteCodes/13Graphics.qmd
          - text: "𝟭𝟰 Software Development Concepts"
            href: WebsiteCodes/14Software.qmd
      - text: "🎃ＥＸＥＲＣＩＳＥ＃４"
        href: WebsiteCodes/Exercise4.qmd
      - text: "👍ＳＯＬＵＴＩＯＮＳ＃４"
        href: WebsiteCodes/Solutions4.qmd
      - text: "Concluding Remarks🎉"
        href: WebsiteCodes/ConcludingRemarks.qmd


format:
  html:
    theme: cosmo
    code-copy: true
    code-overflow: wrap
    toc: true


filters:
  - include-files.lua
  - quarto