added shortest paths code using yen

Author: ranjana-mishra

Diff for: rustworkx-core/src/shortest_path/mod.rs

@@ -20,6 +20,7 @@ mod astar;
 mod bellman_ford;
 mod dijkstra;
 mod k_shortest_path;
+mod simple_shortest_paths;
 
 pub use all_shortest_paths::all_shortest_paths;
 pub use astar::astar;

Diff for: rustworkx-core/src/shortest_path/simple_shortest_paths.rs

@@ -0,0 +1,381 @@
+// Licensed under the Apache License, Version 2.0 (the "License"); you may
+// not use this file except in compliance with the License. You may obtain
+// a copy of the License at
+//
+//     http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
+// WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
+// License for the specific language governing permissions and limitations
+// under the License.
+//
+// This Library is for finding out the shortest paths in increasing cost order.
+
+use crate::petgraph::algo::Measure;
+use crate::petgraph::graph::{Graph, Node, NodeIndex};
+use crate::petgraph::visit::{EdgeRef, IntoEdgeReferences, IntoEdges, VisitMap, Visitable};
+use crate::petgraph::EdgeType;
+
+use std::collections::hash_map::Entry::{Occupied, Vacant};
+use std::collections::{BinaryHeap, HashMap, HashSet};
+use std::fmt::Debug;
+use std::hash::Hash;
+
+use crate::min_scored::MinScored;
+use petgraph::data::DataMap;
+use petgraph::graph::{Edge, EdgeIndex, EdgeReference, GraphIndex};
+use petgraph::visit::{GraphBase, GraphRef};
+use rand::Rng;
+
+#[derive(Debug)]
+struct NodeData<N, K> {
+    pub node_id: N,           // node identifier
+    pub parent_id: Option<N>, // parent identifier
+    pub cost: K,              // cost of minimum path from source
+}
+
+pub fn dijkstra_shortest_path_with_excluded_prefix<G, F, K>(
+    graph: G,
+    start: G::NodeId,
+    target: G::NodeId,
+    mut edge_cost: F,
+    excluded_prefix: &HashSet<G::NodeId>,
+) -> (Vec<G::NodeId>, K)
+where
+    G: Visitable + IntoEdges,
+    G::NodeId: Eq + Hash,
+    F: FnMut(G::EdgeRef) -> K,
+    K: Measure + Copy,
+    G::NodeId: Debug,
+    <G as IntoEdgeReferences>::EdgeRef: PartialEq,
+{
+    let mut visit_map = graph.visit_map();
+    let mut scores: HashMap<G::NodeId, K> = HashMap::new();
+    let mut pathnodes: HashMap<G::NodeId, NodeData<G::NodeId, K>> = HashMap::new();
+    let mut visit_next: BinaryHeap<MinScored<K, G::NodeId>> = BinaryHeap::new();
+    visit_next.push(MinScored(K::default(), start));
+    scores.insert(start, K::default());
+    pathnodes.insert(
+        start,
+        NodeData {
+            node_id: start,
+            parent_id: None,
+            cost: K::default(),
+        },
+    );
+
+    // In the loop below, all the nodes which have been assigned the shortest path from source
+    // are marked as visited. The visisted nodes are not present in the heap, and hence we do not
+    // consider edges to visited nodes.
+    while let Some(MinScored(node_score, node)) = visit_next.pop() {
+        visit_map.visit(node);
+
+        // traverse the unvisited neighbors of node.
+        for edge in graph.edges(node) {
+            let v = edge.target();
+
+            // don't traverse the nodes marked for exclusion, or which have been visited.
+            if visit_map.is_visited(&v) || excluded_prefix.contains(&v) {
+                continue;
+            }
+
+            let edge_weight = edge_cost(edge);
+            match scores.entry(v) {
+                Occupied(mut ent) => {
+                    if node_score + edge_weight < *ent.get() {
+                        // the node leads to shorter path to v. We update the score in the priority heap
+                        // Since this parent defines the new shortest path, we update the entry in pathnodes
+                        // with this parent, discarding any earlier entry with other parent(s).
+                        scores.insert(v, node_score + edge_weight);
+                        visit_next.push(MinScored(node_score + edge_weight, v));
+                        if let Some(v_pnode) = pathnodes.get(&v) {
+                            let new_node: NodeData<G::NodeId, K> = NodeData {
+                                node_id: v_pnode.node_id,
+                                parent_id: Some(node),
+                                cost: node_score + edge_weight,
+                            };
+                            pathnodes.insert(v_pnode.node_id, new_node);
+                        } else {
+                            assert_eq!(
+                                true, false,
+                                "Invariant not satisfied, Node {:?} not present in pathnodes",
+                                v
+                            );
+                        }
+                    }
+                }
+                Vacant(_) => {
+                    // the node v has no entry in the priority queue so far.
+                    // We must be visiting it the first time.
+                    // Create the entry in the priority queue and an entry in the pathnodes map.
+                    scores.insert(v, node_score + edge_weight);
+                    visit_next.push(MinScored(node_score + edge_weight, v));
+                    pathnodes.insert(
+                        v,
+                        NodeData {
+                            node_id: v,
+                            parent_id: Some(node),
+                            cost: node_score + edge_weight,
+                        },
+                    );
+                }
+            }
+        }
+    }
+
+    // Now return the path
+    let mut shortest_path: Vec<G::NodeId> = Vec::new();
+    if let Some(target_node) = pathnodes.get(&target) {
+        let min_cost = pathnodes.get(&target).unwrap().cost;
+
+        // Let us just return one shortest path
+        let mut current_node = target_node;
+        shortest_path.push(current_node.node_id);
+        while current_node.node_id != start {
+            current_node = pathnodes.get(&current_node.parent_id.unwrap()).unwrap();
+            shortest_path.push(current_node.node_id);
+        }
+        shortest_path.reverse();
+        (shortest_path, min_cost)
+    } else {
+        (vec![], K::default())
+    }
+}
+
+/// Implementation of Yen's Algorithm to find k shortest paths.
+/// More on Yen's algorithm - https://people.csail.mit.edu/minilek/yen_kth_shortest.pdf
+
+pub fn get_smallest_k_paths_yen<N, K, T>(
+    graph: &mut Graph<N, K, T>,
+    start: NodeIndex,
+    target: NodeIndex,
+    max_paths: usize,
+) -> (Vec<Vec<NodeIndex>>)
+where
+    K: Measure + Copy,
+    T: EdgeType,
+{
+    let mut listA: Vec<Vec<NodeIndex>> = Vec::new(); // list to contain shortest paths
+    let (shortest_path, min_cost) = dijkstra_shortest_path_with_excluded_prefix(
+        &*graph,
+        start,
+        target,
+        |e| *e.weight(),
+        &HashSet::new(),
+    );
+
+    println!("Inserting path of cost {:?} in listA", min_cost);
+    listA.push(shortest_path);
+    // A binary heap that contains the candidate paths. In each iteration the candidate paths with
+    // their costs are pushed on to the heap. The best path from the heap at the end of the iteration
+    // is added to listA.
+    let mut listB: BinaryHeap<MinScored<K, Vec<NodeIndex>>> = BinaryHeap::new();
+    let mut paths_in_listB: HashSet<Vec<NodeIndex>> = HashSet::new();
+
+    for i in 1usize..max_paths {
+        // listA contains the i shortest paths, while listB contains candidate paths.
+        // To determine the (i+1)^th shortest path we proceed as follows (according to Yen's algorithm)
+        // We set the last added path in listA, i.e, the i^{th} shortest path as the current path.
+        // Let x[0],...,x[ell-1] be the vertices in the current path.
+        // We search for (i+1)^th path by considering paths which "diverge" from the current path at one
+        // of the nodes x[0],...,x[ell-2]. However, we restrict these paths not to take diverging edge
+        // which has appeared in any of the previous paths in listA, which are also identical to current
+        // path till the node j. The new path is chosen as the minimum cost path from the following collection.
+        // 1. Paths already in list B,
+        // 2. The collection of shortest diverging paths from each of the nodes x[0],...x[ell-2].
+        // A diverging path at x[j] is formed as union of current path till node x[j], and the shortest path
+        // from x[j] to target after removing prohibited edges (see above).
+
+        let mut current_path = listA[i - 1].to_owned(); // current path is the last added path in listA
+        let mut excluded_edges_map: HashMap<(NodeIndex, NodeIndex), K> = HashMap::new(); // map to keep track of removed edges, which are added back later
+        let mut root_cost = K::default(); // keep track of the cost of current path till diversion point.
+
+        for j in 0usize..current_path.len() - 1 {
+            // we are looking for diversion at current_path[j]
+            let root_node = current_path[j];
+            let next_edge = graph.find_edge(root_node, current_path[j + 1]).unwrap();
+            let next_edge_cost = *graph.edge_weight(next_edge).unwrap();
+
+            for path in listA.iter() {
+                // for each path that agrees with current path till node j,
+                // remove the neighbor of j^{th} node on that path.
+                if path.len() < j + 1 {
+                    continue;
+                }
+
+                if path[0..=j] == current_path[0..=j] {
+                    if let Some(edge) = graph.find_edge(root_node, path[j + 1]) {
+                        excluded_edges_map
+                            .insert((root_node, path[j + 1]), *graph.edge_weight(edge).unwrap());
+                        graph.remove_edge(edge);
+                    }
+                }
+            }
+            // find the shortest path form root_node to target in the graph after removing prohibited edges.
+            let (shortest_root_target_path, path_cost) =
+                dijkstra_shortest_path_with_excluded_prefix(
+                    &*graph,
+                    root_node,
+                    target,
+                    |e| *e.weight(),
+                    &HashSet::from_iter(current_path[0..=j].to_vec().into_iter()),
+                );
+
+            if shortest_root_target_path.len() > 0 {
+                // create new_path by appending current_path till divergence point and the shortest path after that.
+                let mut new_path = current_path[0..j].to_owned();
+                new_path.extend_from_slice(&shortest_root_target_path);
+                // Add the path to listB if it has not been considered already for inclusion in listB
+                if !paths_in_listB.contains(&new_path) {
+                    listB.push(MinScored(root_cost + path_cost, new_path.clone()));
+                    paths_in_listB.insert(new_path);
+                }
+            }
+
+            // @todo We should prune listB to size at most max_paths to be more efficient.
+
+            // add current edge cost to the root cost
+            root_cost = root_cost + next_edge_cost;
+        }
+
+        // finally restore the edges we removed to reset the graph for next iteration
+        for (edge, wt) in &excluded_edges_map {
+            graph.add_edge(edge.0, edge.1, *wt);
+        }
+
+        // remove the path of least cost from listB, and add to listA
+        if let Some(MinScored(path_cost, min_path)) = listB.pop() {
+            println!("Adding path of cost {:?} to listA", path_cost);
+            listA.push(min_path);
+        } else {
+            // we have run out of candidates paths now.
+            return listA;
+        }
+    }
+
+    listA
+}
+
+
+#[cfg(test)]
+mod tests {
+    use crate::shortest_path::simple_shortest_paths::get_smallest_k_paths_yen;
+    use petgraph::graph::NodeIndex;
+    use petgraph::{Graph, Undirected};
+    use rand::Rng;
+
+    // The function below generates a graph consisting of n hexagons between two terminal vertices.
+    // All edges have weights 1. The illustration below shows the graph for n=2.
+    // In general there are 2^n shortest paths from 0 to 6n+1.
+    //                    2 ----- 3             8 ----- 9
+    //                 /            \         /          \
+    //        0 ---- 1                4 ---- 7             10 ----- 13
+    //                 \            /         \           /
+    //                    5 ----- 6            11 ----- 12
+    //
+    fn generate_n_cycle_example(n: usize) -> (Graph<usize, u32, Undirected>, Vec<NodeIndex>) {
+        let mut g: Graph<usize, u32, Undirected> = Graph::new_undirected();
+        let num_nodes = 6 * n + 2;
+        let mut node_names: Vec<usize> = Vec::new();
+        for i in 0..num_nodes {
+            node_names.push(i);
+        }
+        let mut nodes = (0..num_nodes)
+            .into_iter()
+            .map(|i| g.add_node(node_names[i]))
+            .collect::<Vec<_>>();
+        // build cycles
+        for i in 0..n {
+            let base = 6 * i + 1;
+            for j in 0..6 {
+                g.add_edge(
+                    nodes[base + (j % 6)],
+                    nodes[base + ((j + 1) % 6)],
+                    (j + 1) as u32,
+                );
+            }
+            g.add_edge(nodes[base + 3], nodes[base + 6], 1);
+        }
+
+        g.add_edge(nodes[0], nodes[1], 1);
+
+        (g, nodes)
+    }
+
+    // Generates an undirected cycle of n edges, each with weight 1.
+    fn generate_n_gon_example(n: usize) -> (Graph<usize, u32, Undirected>, Vec<NodeIndex>) {
+        let mut g: Graph<usize, u32, Undirected> = Graph::new_undirected();
+        let num_nodes = n;
+        let mut node_names: Vec<usize> = Vec::new();
+        for i in 0..num_nodes {
+            node_names.push(i);
+        }
+        let mut nodes = (0..num_nodes)
+            .into_iter()
+            .map(|i| g.add_node(node_names[i]))
+            .collect::<Vec<_>>();
+        // build cycles
+        for i in 0..n {
+            g.add_edge(nodes[i], nodes[(i + 1) % n], 1);
+        }
+        (g, nodes)
+    }
+
+    // This function generates an undirected n-gon as in previous example, with additional chords.
+    // The argument step specifies the clockwise distance between vertices connected by the chords.
+    fn generate_n_gon_with_chords_example(
+        n: usize,
+        step: usize,
+    ) -> (Graph<usize, u32, Undirected>, Vec<NodeIndex>) {
+        let mut g: Graph<usize, u32, Undirected> = Graph::new_undirected();
+        let num_nodes = n;
+        let mut node_names: Vec<usize> = Vec::new();
+        for i in 0..num_nodes {
+            node_names.push(i);
+        }
+        let mut nodes = (0..num_nodes)
+            .into_iter()
+            .map(|i| g.add_node(node_names[i]))
+            .collect::<Vec<_>>();
+        // build cycles
+        for i in 0..n {
+            g.add_edge(nodes[i], nodes[(i + 1) % n], 1);
+            g.add_edge(nodes[i], nodes[(i + step) % n], 1);
+        }
+        (g, nodes)
+    }
+
+    #[test]
+    fn test_k_shortest_paths() {
+        let (mut graph, nodes) = generate_n_gon_with_chords_example(6, 2);
+        let paths = get_smallest_k_paths_yen(&mut graph, nodes[0], nodes[1], 10);
+        for path in paths {
+            println!("{:#?}", path);
+        }
+    }
+
+    #[test]
+    fn test_k_shortest_random_graph() {
+        let mut g = Graph::new_undirected();
+        let nodes: Vec<NodeIndex> = (0..5000).map(|_| g.add_node(())).collect();
+        let mut rng: rand::prelude::ThreadRng = rand::thread_rng();
+        for _ in 0..62291 {
+            // Adjust the number of edges as desired
+            let a = rng.gen_range(0..nodes.len());
+            let b = rng.gen_range(0..nodes.len());
+            let weight = rng.gen_range(1..100); // Random weight between 1 and 100
+            if a != b {
+                // Prevent self-loops
+                g.add_edge(nodes[a], nodes[b], weight as f32);
+            }
+        }
+        println!("Graph created");
+        let source = nodes[1];
+        let target = nodes[4000];
+        let shortest_path_get: usize = 5;
+        for p in get_smallest_k_paths_yen(&mut g, source, target, 10) {
+            println!("Path:  {:#?} ", p);
+        }
+    }
+}