Update supported Python, move to pyproject.toml, and fix CI (#62)

Author: RMeli

.github/workflows/CI.yaml

@@ -1,76 +1,60 @@
 name: CI
 
 on:
-  # GitHub has started calling new repo's first branch "main" https://github.com/github/renaming
-  # Existing codes likely still have "master" as the primary branch
-  # Both are tracked here to keep legacy and new codes working
-  push:
-    branches:
-      - "master"
-      - "main"
-  pull_request:
-    branches:
-      - "master"
-      - "main"
-  schedule:
-    # Nightly tests run on master by default:
-    #   Scheduled workflows run on the latest commit on the default or base branch.
-    #   (from https://help.github.com/en/actions/reference/events-that-trigger-workflows#scheduled-events-schedule)
-    - cron: "0 0 * * *"
+    # GitHub has started calling new repo's first branch "main" https://github.com/github/renaming
+    # Existing codes likely still have "master" as the primary branch
+    # Both are tracked here to keep legacy and new codes working
+    push:
+        branches:
+            - "master"
+            - "main"
+    pull_request:
+        branches:
+            - "master"
+            - "main"
+    schedule:
+        # Nightly tests run on master by default:
+        #   Scheduled workflows run on the latest commit on the default or base branch.
+        #   (from https://help.github.com/en/actions/reference/events-that-trigger-workflows#scheduled-events-schedule)
+        - cron: "0 0 * * *"
 
 jobs:
-  test:
-    name: Test on ${{ matrix.os }}, Python ${{ matrix.python-version }}
-    runs-on: ${{ matrix.os }}
-    strategy:
-      matrix:
-        os: [ubuntu-latest]
-        python-version: ["3.10", "3.11", "3.12"]
-
-    steps:
-    - uses: actions/checkout@v4
-
-    - name: Infos
-      shell: bash
-      run: |
-        uname -a
-        df -h
-        ulimit -a
-
-
-    # More info on options: https://github.com/conda-incubator/setup-miniconda
-    - uses: conda-incubator/setup-miniconda@v3
-      with:
-        python-version: ${{ matrix.python-version }}
-        environment-file: devtools/conda-envs/gninatorch-CI.yaml
-        mamba-version: "*"
-        channels: pytorch,conda-forge
-        channel-priority: true
-        activate-environment: gninatorch
-        auto-update-conda: false
-        auto-activate-base: false
-        show-channel-urls: true
-
-    - name: Install package
-
-      # conda setup requires this special shell
-      shell: bash -l {0}
-      run: |
-        python -m pip install . --no-deps
-        conda list
-
-
-    - name: Run tests
-
-      # conda setup requires this special shell
-      shell: bash -l {0}
-
-      run: |
-        pytest -v --cov=gninatorch --cov-report=xml --color=yes tests/ --nogpu
-
-    - name: CodeCov
-      uses: codecov/codecov-action@v5
-      with:
-        files: ./coverage.xml
-        flags: unittests
-        name: codecov-${{ matrix.os }}-py${{ matrix.python-version }}
+    test:
+        name: Test on ${{ matrix.os }}, Python ${{ matrix.python-version }}
+        runs-on: ${{ matrix.os }}
+        strategy:
+            matrix:
+                os: [ubuntu-latest]
+                python-version: ["3.12", "3.13"]
+
+        steps:
+            - uses: actions/checkout@v4
+              with:
+                  fetch-depth: 0
+
+            - name: Infos
+              shell: bash
+              run: |
+                  uname -a
+                  df -h
+                  ulimit -a
+
+            - name: Install uv
+              uses: astral-sh/setup-uv@v7
+              with:
+                  python-version: ${{ matrix.python-version }}
+                  enable-cache: true
+                  cache-dependency-glob: "pyproject.toml"
+
+            - name: Install package
+              run: uv sync --extra all --extra test
+
+            - name: Run tests
+              run: uv run pytest -v --cov=gninatorch --cov-report=xml --color=yes tests/ --nogpu
+
+            - name: CodeCov
+              uses: codecov/codecov-action@v5
+              with:
+                  files: ./coverage.xml
+                  flags: unittests
+                  name: codecov-${{ matrix.os }}-py${{ matrix.python-version }}

.gitignore

@@ -128,6 +128,7 @@ nohup.out
 
 # ML Tracking
 mlruns/
+*.db
 
 # macOS
-.DS_Store
+.DS_Store

devtools/conda-envs/gninatorch-CI.yaml

@@ -3,14 +3,6 @@
 # Add imports here
 # from .gninatorch import *
 
-# Handle versioneer
-from ._version import get_versions
+from ._version import __version__, __commit_id__
 
-versions = get_versions()
-__version__ = versions["version"]
-__git_revision__ = versions["full-revisionid"]
-del get_versions, versions
-
-from . import _version
-
-__version__ = _version.get_versions()["version"]
+__git_revision__ = __commit_id__ or ""