Main tool: gotree
Code repository: https://github.com/evolbioinfo/gotree
Basic information on how to use this tool:
- executable:
gotree - help:
--help - version:
version - description: A comprehensive set of command-line tools for manipulating, modifying, and computing statistics on phylogenetic trees (Newick, Nexus, PhyloXML).
Full documentation: https://github.com/evolbioinfo/gotree/blob/master/docs/index.md
# Calculate basic statistics for a tree file
gotree stats --input input_tree.nwk
# Reroot a tree at the midpoint
gotree reroot midpoint --input input_tree.nwk --output rooted_tree.nwk
# Generate a random tree
gotree generate random --tips-count 10 --seed 42