Skip to content

Latest commit

 

History

History

Folders and files

NameName
Last commit message
Last commit date

parent directory

..
 
 
 
 

README.md

gotree container

Main tool: gotree

Code repository: https://github.com/evolbioinfo/gotree

Basic information on how to use this tool:

  • executable: gotree
  • help: --help
  • version: version
  • description: A comprehensive set of command-line tools for manipulating, modifying, and computing statistics on phylogenetic trees (Newick, Nexus, PhyloXML).

Full documentation: https://github.com/evolbioinfo/gotree/blob/master/docs/index.md

Example Usage

# Calculate basic statistics for a tree file
gotree stats --input input_tree.nwk

# Reroot a tree at the midpoint
gotree reroot midpoint --input input_tree.nwk --output rooted_tree.nwk

# Generate a random tree
gotree generate random --tips-count 10 --seed 42