ozymandias/DESCRIPTION at master · RamsinghLab/ozymandias · GitHub

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Package: ozymandias
Title: Tools for region- and process-centric analyses of multiple assay types
Version: 0.23
Date: 2015-10-23
Author: Tim Triche, Jr.
Maintainer: Tim Triche, Jr. <tim.triche@gmail.com>
Authors@R: c(person("Tim", "Triche, Jr.", role = c("aut","cre"),
                    email = "tim.triche@gmail.com"),
             person("Steve", "Horvath", role = c("aut", "ctb")))
Description: A pipeline to process and match Illumina DNA methylation data, SNP barcodes, expression and/or SV/CNV/SNV data for subjects who may have "holes"
Depends: ConsensusClusterPlus, RPMM, mclust, survival, GEOquery, DMRcate,conumee
Imports: methods, limma, minfi, Matrix, matrixStats, rtracklayer, GenomicRanges
Suggests: knitr, pathview, SPIA, FEM, PWMEnrich, ozymandiasData
License: AGPL
VignetteBuilder: knitr
biocViews: GenomeAnnotation, DNAMethylation, FeatureExtraction