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@Article{nordlie:2009,
author = { Nordlie, E. and Gewaltig, M. and Plesser, H.E. },
title = { Towards reproducible descriptions of neuronal network models },
journal = { PLoS Computational Biology },
year = { 2009 },
volume = { 5 },
number = { 8 },
pages = { e1000456 },
doi = { 10.1371/journal.pcbi.1000456 }
}
@online{wilson:2016,
author = {Greg Wilson},
title = {Software Carpentry: Lessons Learned},
version = {2},
date = {2016-01-28},
url = {http://f1000research.com/articles/3-62/v2},
doi = {10.12688/f1000research.3-62.v2}
}
@Article{sandve:2013,
author = {Geir Kjetil Sandve and Anton Nekrutenko and James Taylor and
Eivind Hovig},
title = {Ten Simple Rules for Reproducible Computational Research},
journal = {PLoS Computuational Biology},
year = 2013,
volume = 9,
number = 10,
doi = {10.1371/journal.pcbi.1003285}
}
@Article{halchenko:2015,
author = {Yaroslav O. Halchenko and Michael Hanke},
title = {{Four aspects to make science open “by design” and not as an
after-thought}},
journal = {GigaScience},
year = {2015},
doi = {10.1186/s13742-015-0072-7}
}
@Article{janz:2015,
author = {Nicole Janz},
title = {Bringing the Gold Standard Into the Class Room: Replication
in University Teaching},
journal = {International Studies Perspectives},
year = 2015,
doi = {10.1111/insp.12104}
}
@Article{hinsen:2015,
title = {{Writing Software Specifications}},
author = {Hinsen, Konrad},
journal = {Computing in Science and Engineering},
publisher = {Institute of Electrical and Electronics Engineers},
volume = 17,
number = 3,
year = 2015,
doi = {10.1109/MCSE.2015.64},
}
@Inbook{crook:2013,
author = {Crook, Sharon M. and Davison, Andrew P. and Plesser, Hans
E.},
editor = {Bower, M. James},
chapter = {Learning from the Past: Approaches for Reproducibility in
Computational Neuroscience},
title = {20 Years of Computational Neuroscience},
year = "2013",
publisher = "Springer New York",
address = "New York, NY",
pages = "73--102",
doi = "10.1007/978-1-4614-1424-7_4",
}
@Article{wilson:2014,
author = {Greg Wilson and D. A. Aruliah and C. Titus Brown and Neil
P. Chue Hong and Matt Davis and Richard T. Guy and Steven
H. D. Haddock and Kathryn D. Huff and Ian M. Mitchell and
Mark D. Plumbley and Ben Waugh and Ethan P. White and Paul
Wilson},
title = {Best Practices for Scientific Computing},
journal = {PLoS Biology},
year = 2014,
volume = 12,
number = 1,
doi = {10.1371/journal.pbio.1001745}
}
@Article{topalidou:2015:b,
author = {Meropi Topalidou and Nicolas P. Rougier},
title = {[Re] Interaction between cognitive and motor cortico-basal
ganglia loops during decision making: a computational study},
journal = {ReScience},
year = 2015,
volume = 1,
number = 1,
doi = {10.5281/zenodo.47146},
url = {https://github.com/ReScience-Archives/ReScience-Entry-Topalidou-Rougier-2015}
}
@Article{stachelek:2016,
author = {Joseph Stachelek},
title = {[Re] Least-cost modelling on irregular landscape graphs},
journal = {ReScience},
year = 2016,
volume = 2,
number = 1,
doi = {10.5281/zenodo.45852},
url = {https://github.com/ReScience-Archives/Stachelek-2016/}
}
@Article{viejo:2016,
author = {Guillaume Viejo and Benoît Girard and Mehdi Khamassi},
title = {[Re] Speed/accuracy trade-off between the habitual and the
goal-directed process},
journal = {ReScience},
year = 2016,
volume = 2,
number = 1,
doi = {10.5281/zenodo.27944},
url = {https://github.com/ReScience-Archives/Viejo-Girard-Khamassi-2016}
}
@Article{topalidou:2015:a,
author = {Meropi Topalidou and Arthur Leblois and Thomas Boraud and
Nicolas P. Rougier},
title = {A Long Journey into Reproducible Computational Neuroscience},
journal = {Frontiers in Computational Neuroscience},
year = 2015,
volume = 9,
number = 28,
doi = {10.3389/fncom.2015.00030},
}
@InProceedings{collberg:2015,
author = {Christian Collberg and Todd Proebsting and Alex M Warren},
title = {Repeatability and Benefaction in Computer Systems Research —
A Study and a Modest Proposal},
year = {2015},
}
@InProceedings{collberg:2014,
author = {Christian Collberg and Todd Proebsting and Gina Moraila and
Akash Shankaran and Zuoming Shi and Alex M Warren},
title = {Measuring Reproducibility in Computer Systems Research},
year = {2014},
}
@Article{iqbal:2016,
author = {Shareen A. Iqbal and Joshua D. Wallach and Muin J. Khoury and
Sheri D. Schully and John P. A. Ioannidis},
title = {Reproducible Research Practices and Transparency across the
Biomedical Literature},
journal = {PLoS Biology},
year = {2016},
volume = {14},
number = {1},
doi = {10.1371/journal.pbio.1002333},
}
@Article{nosek:2015,
author = {{Open Science Collaboration}},
title = {Estimating the reproducibility of psychological science},
journal = {Science},
year = 2015,
volume = 349,
doi = {10.1126/science.aac4716},
}
@Article{ioannidis:2005,
author = {John P. A. Ioannidis},
title = {Why Most Published Research Findings Are False},
journal = {PLoS Medicine},
year = 2005,
volume = 2,
number = 8,
doi = {10.1371/journal.pmed.0020124},
}