gctf in google colab

[vbachinsky]

Hello.
So, problem in subject.
When I trying to install gctf in colab I have this strange thing:
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Collecting tensorflow>=2.2.0
Downloading tensorflow-2.12.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (585.9 MB)
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Requirement already satisfied: jax>=0.3.15 in /usr/local/lib/python3.9/dist-packages (from tensorflow>=2.2.0->gradient-centralization-tf==0.0.3) (0.4.6)
Collecting tensorboard<2.13,>=2.12
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Collecting tensorflow>=2.2.0
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Downloading tensorflow-2.10.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (578.1 MB)
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Collecting keras-preprocessing>=1.1.1
Downloading Keras_Preprocessing-1.1.2-py2.py3-none-any.whl (42 kB)
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Collecting tensorflow-estimator<2.11,>=2.10.0
Downloading tensorflow_estimator-2.10.0-py2.py3-none-any.whl (438 kB)
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Collecting tensorboard<2.11,>=2.10
Downloading tensorboard-2.10.1-py3-none-any.whl (5.9 MB)
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Collecting tensorflow>=2.2.0
Downloading tensorflow-2.10.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (578.1 MB)
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Downloading tensorflow-2.9.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (511.8 MB)
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Collecting tensorboard<2.10,>=2.9
Downloading tensorboard-2.9.1-py3-none-any.whl (5.8 MB)
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Collecting tensorflow-estimator<2.10.0,>=2.9.0rc0
Downloading tensorflow_estimator-2.9.0-py2.py3-none-any.whl (438 kB)
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Collecting flatbuffers<2,>=1.12
Downloading flatbuffers-1.12-py2.py3-none-any.whl (15 kB)
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Collecting tensorflow>=2.2.0
Downloading tensorflow-2.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (511.8 MB)
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Downloading tensorflow-2.9.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (511.7 MB)
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Downloading tensorflow-2.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (511.7 MB)
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Downloading tensorflow-2.8.4-cp39-cp39-manylinux2010_x86_64.whl (498.1 MB)
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Collecting tensorboard<2.9,>=2.8
Downloading tensorboard-2.8.0-py3-none-any.whl (5.8 MB)
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Collecting tensorflow-estimator<2.9,>=2.8
Downloading tensorflow_estimator-2.8.0-py2.py3-none-any.whl (462 kB)
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Collecting tensorflow>=2.2.0
Downloading tensorflow-2.8.3-cp39-cp39-manylinux2010_x86_64.whl (498.5 MB)
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Downloading tensorflow-2.8.2-cp39-cp39-manylinux2010_x86_64.whl (498.0 MB)
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Downloading tensorflow-2.8.1-cp39-cp39-manylinux2010_x86_64.whl (498.0 MB)
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Downloading tensorflow-2.8.0-cp39-cp39-manylinux2010_x86_64.whl (497.6 MB)
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Collecting tf-estimator-nightly==2.8.0.dev2021122109
Downloading tf_estimator_nightly-2.8.0.dev2021122109-py2.py3-none-any.whl (462 kB)
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Collecting tensorflow>=2.2.0
Downloading tensorflow-2.7.4-cp39-cp39-manylinux2010_x86_64.whl (496.1 MB)
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Collecting tensorflow-estimator<2.8,=2.7.0rc0
Downloading tensorflow_estimator-2.7.0-py2.py3-none-any.whl (463 kB)
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Collecting tensorflow>=2.2.0
Downloading tensorflow-2.7.3-cp39-cp39-manylinux2010_x86_64.whl (495.6 MB)
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Downloading tensorflow-2.7.2-cp39-cp39-manylinux2010_x86_64.whl (495.6 MB)
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Downloading tensorflow-2.7.1-cp39-cp39-manylinux2010_x86_64.whl (495.2 MB)
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Downloading tensorflow-2.7.0-cp39-cp39-manylinux2010_x86_64.whl (489.7 MB)
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Downloading tensorflow-2.6.5-cp39-cp39-manylinux2010_x86_64.whl (464.3 MB)
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Downloading tensorflow-2.6.4-cp39-cp39-manylinux2010_x86_64.whl (464.3 MB)
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Downloading tensorflow-2.6.3-cp39-cp39-manylinux2010_x86_64.whl (463.9 MB)
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Downloading tensorflow-2.6.2-cp39-cp39-manylinux2010_x86_64.whl (458.4 MB)
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Downloading tensorflow-2.6.1-cp39-cp39-manylinux2010_x86_64.whl (458.4 MB)
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Collecting tensorflow-estimator<2.7
Downloading tensorflow_estimator-2.6.0-py2.py3-none-any.whl (462 kB)
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Collecting absl-py=0.10
Downloading absl_py-0.15.0-py3-none-any.whl (132 kB)
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Collecting h5py
Downloading h5py-3.1.0-cp39-cp39-manylinux1_x86_64.whl (4.4 MB)
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Collecting six~=1.15.0
Downloading six-1.15.0-py2.py3-none-any.whl (10 kB)
Collecting numpy>=1.9.1
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Collecting typing-extensions~=3.7.4
Downloading typing_extensions-3.7.4.3-py3-none-any.whl (22 kB)
Collecting termcolor~=1.1.0
Downloading termcolor-1.1.0.tar.gz (3.9 kB)
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Collecting clang~=5.0
Downloading clang-5.0.tar.gz (30 kB)
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Collecting tensorflow>=2.2.0
Downloading tensorflow-2.6.0-cp39-cp39-manylinux2010_x86_64.whl (458.4 MB)
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Downloading tensorflow-2.5.3-cp39-cp39-manylinux2010_x86_64.whl (460.4 MB)
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Collecting keras-nightly~=2.5.0.dev
Downloading keras_nightly-2.5.0.dev2021032900-py2.py3-none-any.whl (1.2 MB)
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Collecting tensorflow-estimator<2.6.0,>=2.5.0
Downloading tensorflow_estimator-2.5.0-py2.py3-none-any.whl (462 kB)
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Collecting grpcio~=1.34.0
Downloading grpcio-1.34.1-cp39-cp39-manylinux2014_x86_64.whl (4.0 MB)
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Collecting wrapt~=1.12.1
Downloading wrapt-1.12.1.tar.gz (27 kB)
Preparing metadata (setup.py) ... done
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Building wheels for collected packages: termcolor, wrapt
Building wheel for termcolor (setup.py) ... done
Created wheel for termcolor: filename=termcolor-1.1.0-py3-none-any.whl size=4845 sha256=90837c6cf89c51bf976dc3b1ce881d853400fc530facc9df5923dc42deed6b56
Stored in directory: /root/.cache/pip/wheels/b6/0d/90/0d1bbd99855f99cb2f6c2e5ff96f8023fad8ec367695f7d72d
Building wheel for wrapt (setup.py) ... done
Created wheel for wrapt: filename=wrapt-1.12.1-cp39-cp39-linux_x86_64.whl size=75942 sha256=dbd0914a708edfc24783a150e35cb19f489f4fb118f089a9c46c9f77579bad2d
Stored in directory: /root/.cache/pip/wheels/98/23/68/efe259aaca055e93b08e74fbe512819c69a2155c11ba3c0f10
Successfully built termcolor wrapt
Installing collected packages: wrapt, typing-extensions, termcolor, tensorflow-estimator, keras-nightly, flatbuffers, six, numpy, keras-preprocessing, h5py, grpcio, absl-py, keras, tensorflow, gradient-centralization-tf
Attempting uninstall: wrapt
Found existing installation: wrapt 1.15.0
Uninstalling wrapt-1.15.0:
Successfully uninstalled wrapt-1.15.0
Attempting uninstall: typing-extensions
Found existing installation: typing_extensions 4.5.0
Uninstalling typing_extensions-4.5.0:
Successfully uninstalled typing_extensions-4.5.0
Attempting uninstall: termcolor
Found existing installation: termcolor 2.2.0
Uninstalling termcolor-2.2.0:
Successfully uninstalled termcolor-2.2.0
Attempting uninstall: tensorflow-estimator
Found existing installation: tensorflow-estimator 2.11.0
Uninstalling tensorflow-estimator-2.11.0:
Successfully uninstalled tensorflow-estimator-2.11.0
Attempting uninstall: flatbuffers
Found existing installation: flatbuffers 23.3.3
Uninstalling flatbuffers-23.3.3:
Successfully uninstalled flatbuffers-23.3.3
Attempting uninstall: six
Found existing installation: six 1.16.0
Uninstalling six-1.16.0:
Successfully uninstalled six-1.16.0
Attempting uninstall: numpy
Found existing installation: numpy 1.22.4
Uninstalling numpy-1.22.4:
Successfully uninstalled numpy-1.22.4
Attempting uninstall: h5py
Found existing installation: h5py 3.8.0
Uninstalling h5py-3.8.0:
Successfully uninstalled h5py-3.8.0
Attempting uninstall: grpcio
Found existing installation: grpcio 1.51.3
Uninstalling grpcio-1.51.3:
Successfully uninstalled grpcio-1.51.3
Attempting uninstall: absl-py
Found existing installation: absl-py 1.4.0
Uninstalling absl-py-1.4.0:
Successfully uninstalled absl-py-1.4.0
Attempting uninstall: keras
Found existing installation: keras 2.11.0
Uninstalling keras-2.11.0:
Successfully uninstalled keras-2.11.0
Attempting uninstall: tensorflow
Found existing installation: tensorflow 2.11.0
Uninstalling tensorflow-2.11.0:
Successfully uninstalled tensorflow-2.11.0
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
ipython 7.9.0 requires jedi>=0.10, which is not installed.
xarray 2022.12.0 requires numpy>=1.20, but you have numpy 1.19.5 which is incompatible.
xarray-einstats 0.5.1 requires numpy>=1.20, but you have numpy 1.19.5 which is incompatible.
typeguard 3.0.2 requires typing-extensions>=4.4.0; python_version < "3.11", but you have typing-extensions 3.7.4.3 which is incompatible.
pyerfa 2.0.0.2 requires numpy>=1.21, but you have numpy 1.19.5 which is incompatible.
pydantic 1.10.6 requires typing-extensions>=4.2.0, but you have typing-extensions 3.7.4.3 which is incompatible.
matplotlib 3.7.1 requires numpy>=1.20, but you have numpy 1.19.5 which is incompatible.
librosa 0.10.0.post2 requires numpy!=1.22.0,!=1.22.1,!=1.22.2,>=1.20.3, but you have numpy 1.19.5 which is incompatible.
librosa 0.10.0.post2 requires typing-extensions>=4.1.1, but you have typing-extensions 3.7.4.3 which is incompatible.
jaxlib 0.4.6+cuda11.cudnn86 requires numpy>=1.20, but you have numpy 1.19.5 which is incompatible.
jax 0.4.6 requires numpy>=1.20, but you have numpy 1.19.5 which is incompatible.
grpcio-status 1.48.2 requires grpcio>=1.48.2, but you have grpcio 1.34.1 which is incompatible.
google-cloud-bigquery 3.4.2 requires grpcio<2.0dev,>=1.47.0, but you have grpcio 1.34.1 which is incompatible.
cmdstanpy 1.1.0 requires numpy>=1.21, but you have numpy 1.19.5 which is incompatible.
bokeh 2.4.3 requires typing-extensions>=3.10.0, but you have typing-extensions 3.7.4.3 which is incompatible.
astropy 5.2.1 requires numpy>=1.20, but you have numpy 1.19.5 which is incompatible.
arviz 0.15.1 requires numpy>=1.20.0, but you have numpy 1.19.5 which is incompatible.
arviz 0.15.1 requires typing-extensions>=4.1.0, but you have typing-extensions 3.7.4.3 which is incompatible.
Successfully installed absl-py-0.15.0 flatbuffers-1.12 gradient-centralization-tf-0.0.3 grpcio-1.34.1 h5py-3.1.0 keras-2.4.3 keras-nightly-2.5.0.dev2021032900 keras-preprocessing-1.1.2 numpy-1.19.5 six-1.15.0 tensorflow-2.5.3 tensorflow-estimator-2.5.0 termcolor-1.1.0 typing-extensions-3.7.4.3 wrapt-1.12.1
I know that issue based only on built-in libraries of g-colab, but it look very strange. Maybe you can fix it?

Best regards, Bachinsky V.