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remove print statement from 03_preprocessing.py
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03_preprocessing.py

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@@ -145,7 +145,6 @@ def process_read_pair(fwd_all_data, rev_all_data):
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# calculate counts (add a count to a possible sequence if the read matches exactly)
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# counts index matches that of sequence index
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counts = [0 for _ in possible_sequences]
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print('Determining counts for {} reads from {} dataset'.format(len(sequences), read_descriptor))
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for i, sequence in enumerate(sequences):
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sequence = sequence[58:223] # this is the unique protein sequence in the read
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if sequence in possible_sequences:

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