| kit_type | stain_type | run_chip_detect | run_quality_control | run_tissue_segmentation | run_cell_segmentation | channel_align | correct_radius | run_qc | run_alignment | run_matrix_extract | run_report | run_annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Stereo-seq_T_FF | DAPI | False | False | True | True | -1 | 10 | True | True | False | False | False |
| Stereo-seq_T_FF | Transcriptomics | False | False | False | False | -1 | 10 | True | True | False | False | False |
| Stereo-seq_T_FF | IF | False | False | True | False | 0 | 10 | True | True | False | False | False |
| Stereo-seq_T_FF | HE | False | False | True | True | -1 | 10 | True | True | False | False | False |
| Stereo-seq_T_FF | ssDNA | False | False | True | True | -1 | 10 | True | True | False | False | False |
| Stereo-CITE_T_FF | DAPI | False | False | True | True | -1 | 10 | True | True | False | False | False |
| Stereo-CITE_T_FF | Transcriptomics | False | False | False | False | -1 | 10 | True | True | False | False | False |
| Stereo-CITE_T_FF | IF | False | False | True | False | 0 | 10 | True | True | False | False | False |
| Stereo-CITE_T_FF | HE | False | False | True | True | -1 | 10 | True | True | False | False | False |
| Stereo-CITE_T_FF | ssDNA | False | False | True | True | -1 | 10 | True | True | False | False | False |
| Stereo-CITE_T_FF | Protein | False | False | False | False | -1 | 10 | True | True | False | False | False |
| Stereo-seq_N_FFPE | DAPI | False | False | True | True | -1 | 10 | True | True | False | False | False |
| Stereo-seq_N_FFPE | Transcriptomics | False | False | False | False | -1 | 10 | True | True | False | False | False |
| Stereo-seq_N_FFPE | IF | False | False | True | False | 0 | 10 | True | True | False | False | False |
| Stereo-seq_N_FFPE | HE | False | False | True | False | -1 | 10 | True | True | False | False | False |
| Stereo-seq_N_FFPE | ssDNA | False | False | True | True | -1 | 10 | True | True | False | False | False |
| Stereo-seq_T_FF_R | DAPI | False | False | True | True | -1 | 10 | True | True | True | False | False |
| Stereo-seq_T_FF_R | Transcriptomics | False | False | True | False | -1 | 10 | True | True | True | False | False |
| Stereo-seq_T_FF_R | IF | False | False | True | False | 0 | 10 | True | True | True | False | False |
| Stereo-seq_T_FF_R | HE | False | False | True | True | -1 | 10 | True | True | True | False | False |
| Stereo-seq_T_FF_R | ssDNA | False | False | True | True | -1 | 10 | True | True | True | False | False |
| Stereo-CITE_T_FF_R | DAPI | False | True | True | True | -1 | 10 | True | True | True | False | False |
| Stereo-CITE_T_FF_R | Transcriptomics | False | False | True | False | -1 | 10 | True | True | True | False | False |
| Stereo-CITE_T_FF_R | IF | False | False | True | True | 0 | 10 | True | True | True | False | False |
| Stereo-CITE_T_FF_R | HE | False | False | True | True | -1 | 10 | True | True | True | False | False |
| Stereo-CITE_T_FF_R | ssDNA | False | True | True | True | -1 | 10 | True | True | True | False | False |
| Stereo-CITE_T_FF_R | Protein | False | False | True | False | -1 | 10 | True | True | True | False | False |
| Stereo-seq_N_FFPE_R | DAPI | False | False | True | True | -1 | 10 | True | True | True | False | False |
| Stereo-seq_N_FFPE_R | Transcriptomics | False | False | True | False | -1 | 10 | True | True | True | False | False |
| Stereo-seq_N_FFPE_R | IF | False | False | True | False | 0 | 10 | True | True | True | False | False |
| Stereo-seq_N_FFPE_R | HE | False | False | True | True | -1 | 10 | True | True | True | False | False |
| Stereo-seq_N_FFPE_R | ssDNA | False | False | True | True | -1 | 10 | True | True | True | False | False |