You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Copy file name to clipboardExpand all lines: docs/source/troubleshooting.rst
+22-18Lines changed: 22 additions & 18 deletions
Display the source diff
Display the rich diff
Original file line number
Diff line number
Diff line change
@@ -31,24 +31,6 @@ Whether you are using DCA or schematic API or schematic library/CLI, the followi
31
31
-H 'accept: application/json' ...
32
32
33
33
34
-
Manifest Generate: `KeyError: entityId`
35
-
---------------------------------------
36
-
37
-
If there is currently a manifest in your "Top Level Folder" on Synapse with an incorrect Filename BUT entityId column.
38
-
You will be able to run manifest generate to create a new manifest with the new Filenames. However, If this manifest on Synapse does
39
-
NOT have the entityId column you will encounter that error.
40
-
41
-
To fix: You will want to first check if your "Top Level Folder" has a manifest without the entityId column.
42
-
If so, you can either submit your manifest using schematic OR (the less preferred solution) manually add the entityId column to the manifest on Synapse.
If you do NOT have a manifest in your "Top Level Folder" on Synapse and your File entities in this folder are annotated with 'eTag' key and you try to generate a manifest, it will fail.
48
-
49
-
To fix: This should be fixed in schematic, but for now, remove the 'eTag' annotation from your file.
50
-
51
-
52
34
Manifest Submit: `RuntimeError: failed with SynapseHTTPError('400 Client Error: nan is not a valid Synapse ID.')`
@@ -86,3 +68,25 @@ and the validation rule uses the "display" value of what's expected in the Compo
86
68
but the actual Component name is "ImagingAssayTemplate".
87
69
88
70
To fix: Check if your manifest has invalid Component values and fill it out correctly. Using the above example, fill out your Component column with "ImagingAssayTemplate"
71
+
72
+
73
+
Manifest Generate: `KeyError: entityId`
74
+
---------------------------------------
75
+
76
+
Fixed: v24.12.1
77
+
78
+
If there is currently a manifest in your "Top Level Folder" on Synapse with an incorrect Filename BUT entityId column.
79
+
You will be able to run manifest generate to create a new manifest with the new Filenames. However, If this manifest on Synapse does
80
+
NOT have the entityId column you will encounter that error.
81
+
82
+
To fix: You will want to first check if your "Top Level Folder" has a manifest without the entityId column.
83
+
If so, you can either submit your manifest using schematic OR (the less preferred solution) manually add the entityId column to the manifest on Synapse.
If you do NOT have a manifest in your "Top Level Folder" on Synapse and your File entities in this folder are annotated with 'eTag' key and you try to generate a manifest, it will fail.
91
+
92
+
To fix: This should be fixed in schematic, but for now, remove the 'eTag' annotation from your file.
0 commit comments