A Part-to-Whole Circular Cell Explorer

Siyuan Zhao and G. Elisabeta Marai

Data

This project uses data from Bio+Med Challenge 2024 and Visium data from Kleshchevnikov et al., 2022, filter by sample ST8059049

Setup Instructions

This project uses Flask to provide data and API and React to provide data display

Backend

1. Install and update using pip

2. Go to RedesignChallenge/Backend folder

3. Create venv environment(Mac command)

   python -m venv venv
   

4. Run venv environment(Mac command)

   source venv/bin/activate
   

5. You'll need Flask and other related packages installed

   pip install -r requirements.txt
   

6. Run the Flask Application

   python server.py
   

Frontend

1. Go RedesignChallenge/Frontend folder

2. Install Node.js(if you do not have on your local machine)

3. Install necessary packages

   npm install
   

4. Run the React

   npm start