Merge branch 'main' into renovate/actions-checkout-7.x

Author: SevLG

requirements-top.txt

@@ -11,4 +11,4 @@ gunicorn==26.0.0
 biopython==1.87
 pytest==9.1.0
 pytest-env==1.6.0
-pyzipper==0.3.6
+pyzipper==0.4.0

requirements.txt

@@ -1,8 +1,8 @@
-alembic==1.18.4
+alembic==1.18.5
 apispec==6.10.0
 biopython==1.87
 blinker==1.9.0
-click==8.3.3
+click==8.4.2
 Flask==3.1.3
 flask-cors==6.0.5
 Flask-Migrate==4.1.0
@@ -23,8 +23,8 @@ Pygments==2.20.0
 pytest==9.1.0
 pytest-env==1.6.0
 python-dotenv==1.2.2
-pyzipper==0.3.6
-SQLAlchemy==2.0.50
+pyzipper==0.4.0
+SQLAlchemy==2.0.51
 typing_extensions==4.15.0
 webargs==8.7.1
 Werkzeug==3.1.8