Pre-processing of .d?

[cutleraging]

It says in your manuscript that this app also accepts .d data from Bruker instruments, but it's not clear in "Getting Started – DIA Preprocesing" how one does this. Do I just use the output from DIA-NN? Though it seems it needs more files such as fill_times, sn, tic.

Also, what is the recommended way to run DIA-NN before running your app?

Your would be appreciated,
Ronnie

[cutleraging]

Hi all,

Any help on this?

Thanks,
Ronnie