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[pre-commit.ci] auto fixes from pre-commit.com hooks
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src/probeinterface/plotting.py

Lines changed: 8 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -21,7 +21,7 @@ def create_probe_collections(
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probe_shape_kwargs: dict = {},
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):
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"""Create PolyCollection objects for a Probe.
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Parameters
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----------
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probe : Probe
@@ -36,7 +36,7 @@ def create_probe_collections(
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Dict with kwargs for contacts (e.g. alpha, edgecolor, lw)
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probe_shape_kwargs : dict, default: {}
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Dict with kwargs for probe shape (e.g. alpha, edgecolor, lw)
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Returns
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-------
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poly : PolyCollection
@@ -46,9 +46,11 @@ def create_probe_collections(
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"""
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if probe.ndim == 2:
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from matplotlib.collections import PolyCollection
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Collection = PolyCollection
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elif probe.ndim == 3:
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from mpl_toolkits.mplot3d.art3d import Poly3DCollection
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Collection = Poly3DCollection
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else:
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raise ValueError(f"Unexpected probe.ndim: {probe.ndim}")
@@ -70,7 +72,7 @@ def create_probe_collections(
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vertices = probe.get_contact_vertices()
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poly = Collection(vertices, color=contacts_colors, **_contacts_kargs)
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if contacts_values is not None:
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poly.set_array(contacts_values)
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poly.set_cmap(cmap)
@@ -80,9 +82,10 @@ def create_probe_collections(
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planar_contour = probe.probe_planar_contour
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if planar_contour is not None:
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poly_contour = Collection([planar_contour], **_probe_shape_kwargs)
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return poly, poly_contour
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def plot_probe(
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probe,
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ax=None,
@@ -174,7 +177,7 @@ def plot_probe(
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ax.add_collection3d(poly)
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if poly_contour is not None:
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ax.add_collection3d(poly_contour)
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if show_channel_on_click:
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assert probe.ndim == 2, "show_channel_on_click works only for ndim=2"
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