Spestimator version 0.3.0.235#1719
Merged
Merged
Conversation
…ADME.md has been updated to include version 0.3.0.235 in the versions dropdown for spestimator. The program specific README.md is maintained from the prior version; no changes other than a updated 16S database have been made according to the release notes. The program license is still MIT licensed.
Contributor
|
@staphb-dockerbuilds-diff spestimator 0.3.0.234 0.3.0.235 |
Dockerfile Diff: spestimatorComparing: 0.3.0.234 -> 0.3.0.235 --- build-files/spestimator/0.3.0.234/Dockerfile 2026-06-26 18:45:25.052394917 +0000
+++ build-files/spestimator/0.3.0.235/Dockerfile 2026-06-26 18:45:25.052508459 +0000
@@ -1,11 +1,11 @@
FROM ubuntu:noble AS app
-ARG SOFTWARENAME_VER="0.3.0.234"
+ARG SPESTIMATOR_VER="0.3.0.235"
LABEL base.image="ubuntu:noble"
LABEL dockerfile.version="1"
LABEL software="Spestimator"
-LABEL software.version="${SOFTWARENAME_VER}"
+LABEL software.version="${SPESTIMATOR_VER}"
LABEL description="Uses 16S to identify a range of possible species."
LABEL website="https://github.com/erinyoung/Spestimator"
LABEL license="https://github.com/erinyoung/Spestimator/blob/main/LICENSE"
@@ -19,7 +19,7 @@
python3-pip && \
apt-get autoclean && rm -rf /var/lib/apt/lists/*
-RUN pip install --no-cache-dir --break-system-packages spestimator==${SOFTWARENAME_VER} && \
+RUN pip install --no-cache-dir --break-system-packages spestimator==${SPESTIMATOR_VER} && \
spestimator -h && \
mkdir /data
|
Contributor
|
Tests worked |
erinyoung
approved these changes
Jun 26, 2026
erinyoung
left a comment
Contributor
There was a problem hiding this comment.
I have no changes to recommend. Thank you for putting this together!
Contributor
|
Thank you for putting this together! You can check the status of the deploy here : https://github.com/StaPH-B/docker-builds/actions/runs/28259127847 |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Pull Request (PR) checklist:
docker build --tag samtools:1.15test --target test docker-builds/build-files/samtools/1.15)docker-builds/build-files/spades/3.12.0/Dockerfile)build-files/shigatyper/2.0.1/test.sh)docker-builds/build-files/spades/3.12.0/README.md)PR Description:
Updated SOFTWARENAME_VER to be SPESTIMATOR_VER=0.3.0.235. The main README.md has been updated to include version 0.3.0.235 in the versions dropdown for spestimator. The program specific README.md is maintained from the prior version; no changes other than a updated 16S database have been made according to the release notes. The program license is still MIT licensed.