Augur 33.4.1#1721
Merged
Merged
Conversation
…ed program-specific README.md with updated python packages. Added 33.4.1 to versions dropdown entry for Augur. The program license remains the same.
Contributor
|
@staphb-dockerbuilds-diff augur 33.2.0 33.4.1 |
Dockerfile Diff: augurComparing: 33.2.0 -> 33.4.1 --- build-files/augur/33.2.0/Dockerfile 2026-06-26 18:47:17.861286187 +0000
+++ build-files/augur/33.4.1/Dockerfile 2026-06-26 18:47:17.861364694 +0000
@@ -1,6 +1,6 @@
FROM python:3.12-slim AS app
-ARG AUGUR_VER="33.2.0"
+ARG AUGUR_VER="33.4.1"
ARG SEQKIT_VER="2.13.0"
# LABEL instructions tag the image with metadata that might be important to the user
@@ -49,7 +49,7 @@
FROM app AS test
-RUN augur --help
+RUN augur --help && augur version
WORKDIR /test
|
Contributor
|
Tests worked |
erinyoung
approved these changes
Jun 26, 2026
erinyoung
left a comment
erinyoung
left a comment
Contributor
There was a problem hiding this comment.
I have no changes to recommend. Let's get this merged and deployed!
Contributor
|
Thank you for putting this together! You can check the status of the deploy here : https://github.com/StaPH-B/docker-builds/actions/runs/28259435349 |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Pull Request (PR) checklist:
docker build --tag samtools:1.15test --target test docker-builds/build-files/samtools/1.15)docker-builds/build-files/spades/3.12.0/Dockerfile)build-files/shigatyper/2.0.1/test.sh)docker-builds/build-files/spades/3.12.0/README.md)PR Description:
Updated AUGUR_VER to 33.4.1. Added a version command for augur. Updated program-specific README.md with updated python packages. Added 33.4.1 to versions dropdown entry for Augur. The program license remains the same.