+**About**: This training will provide hands-on experience running basic bioinformatics pipelines using a command line interface (CLI) that will process raw sequencing reads, produce high-quality assembled genomes using two different assembly methods, and perform downstream analyses. Along with first-hand experience running bioinformatics pipelines, participants will gain an understanding of the purpose and importance of each step within the workflow. Key concepts will include sequence quality interpretation, genome assembly, phylogenetic analysis, and implementing best practices for bioinformatics pipelines in public health.
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