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ScoresdocumentationImprovements or additions to documentationImprovements or additions to documentationenhancementNew feature or requestNew feature or request
Description
Geneset scores don't always match the score type (e.g. values != 1 or 0 for "Binary" scores), indicating that users may accidentally be choosing the wrong score types- this can affect what genesets are returned in searches and are visible to be included for analyses. It also affects how the genesets are thresholded, since, for example, "Effect" has a different default threshold rule than "P-Value". Please see GS407897 for an example of mismatched score_types.
I am suggesting there be rules or checks for the various score types (e.g. "P-value" must be a positive number between 0 and 1, "Binary" must be 0 or 1, etc.). If the values don't match the rules for the score type, the user is notified and can correct the score type.
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ScoresdocumentationImprovements or additions to documentationImprovements or additions to documentationenhancementNew feature or requestNew feature or request