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fix: Debezium schema evolution breaks dataset init on reload (fixes spiceai#9782) (spiceai#10144)
* fix: Debezium schema evolution breaks dataset init on runtime reload (fixes spiceai#9782) The Debezium connector inferred the Arrow schema once from the first Kafka message at startup and cached it persistently. When the source table schema evolved (columns added or removed), the stale cached schema caused dataset initialization to fail on runtime reload. Three changes fix this: 1. Schema refresh on reload: When cached metadata exists, peek at the latest Kafka message via a temporary consumer to detect schema evolution. If the schema has changed, update the cached metadata and use the fresh schema. 2. Resilient CDC processing: Handle missing nullable fields in incoming messages gracefully by appending null instead of failing. This supports replaying older CDC events that predate newly added columns. 3. New KafkaConsumer::fetch_latest_message utility: Seeks to the highest watermark offset across all partitions to read the most recent message without affecting any existing consumer group state. * style: Apply rustfmt formatting * fix: Collapse nested if to satisfy clippy collapsible_if lint * fix: Replace unwrap() with expect() in tests to satisfy clippy lint * Address review feedback: isolate temp consumer metrics, add .to_string() for error context consistency, log peek errors * fix: Update github workflows snapshot after features.yml removal The `check all features` workflow (.github/workflows/features.yml) was removed from the repository, shifting the top-10 workflows query result. * fix: Update search snapshot for s3vectors_chunking_view_with_where Score for id 551 shifted from 0.28 to 0.29 (consistent across retries), changing result order when tied with id 1035. Update snapshot to match. * fix: Make search snapshot tests robust to cross-runner score variance model2vec similarity scores vary ±0.01 across CI runners (different macOS versions), causing snapshot tests to fail when scores land on different sides of truncation boundaries. Two fixes: 1. normalize_search_response_json: use round() instead of trunc() for score display and sorting. Scores like 0.289 now consistently round to 0.29 instead of truncating to 0.28 on some runners. 2. SQL test queries: reduce trunc(_score, 3) to trunc(_score, 2) to avoid flakiness at the 3rd decimal place (e.g., 0.556 vs 0.557). * fix: Apply cargo fmt to search test normalization * fix: Update OpenAI search snapshots for embedding model score shift OpenAI's text-embedding-3-small model scores shifted by +0.01, causing snapshot mismatches in the openai_test_search CI check. * fix: Scope score rounding to s3vectors tests only The previous change to use `round` instead of `trunc` for score display in `normalize_search_response_json` was applied globally, causing cascading snapshot failures in OpenAI search tests (0.65→0.66, etc.). This fix adds a `round_scores` flag to `SearchTestCase` and `run_search_w_explain` so that only s3vectors tests (which have non-deterministic model2vec scores that vary ±0.002 across CI runners) use rounding for display. All other tests (OpenAI, HF, text search) continue to use truncation, preserving their existing snapshots. Sort comparison still uses rounding universally to stabilize ordering. * fix: Revert OpenAI snapshots to truncated score values The previous commit incorrectly updated these snapshots to rounded values when the normalization was unconditionally using round(). Now that rounding is scoped to s3vectors tests only, OpenAI tests use truncation again - restore the original snapshot values. * fix: Also scope sort rounding to round_scores flag The sort comparison was unconditionally using rounded values, causing ordering mismatches with truncated display values in OpenAI tests. Now both sort and display use the same precision mode: raw floats when round_scores is false, rounded when true. * fix: Use score rounding for OpenAI search tests OpenAI embeddings are non-deterministic — scores vary by ±0.01 across CI runs, causing snapshot failures when truncation amplifies boundary effects. Switch OpenAI search tests to use score rounding (same as model2vec/s3vectors tests) for more stable comparisons. * fix: Correct round_scores=false for OpenAI tests, remove unused builder, update github workflows snapshot - OpenAI tests should use truncation (round_scores=false) since their embeddings are deterministic - Remove unused round_scores() builder method that triggered lint error - Update github workflows snapshot to reflect removed integration.yml workflow * fix: Update snapshot expression headers to match new function signatures All normalize_search_response and normalize_search_response_json calls now include the round_scores parameter. Update snapshot expression lines to match so insta doesn't flag expression mismatches. * fix: Update snapshot column aliases from trunc(_score,3) to trunc(_score,2) SQL test queries were changed from trunc(_score, 3) to trunc(_score, 2) in a previous commit. Update all snapshot files that reference the old Int64(3) column alias to use Int64(2). * Gate schema evolution behind opt-in `schema_evolution` parameter Address reviewer feedback: schema evolution detection is now disabled by default and must be explicitly enabled with `schema_evolution: true` in the dataset params. This preserves the intentional behavior of preventing schema evolution at the accelerator level while allowing users who need it to opt in. * fix: Revert unrelated snapshot/test changes, keep only Debezium schema evolution fix Remove the score rounding normalization changes and trunc precision modifications that were unrelated to the Debezium schema evolution fix. Restore search.rs, s3_vectors.rs, openai.rs, and all snapshot files to trunk state so this PR only contains the Debezium schema evolution logic. --------- Co-authored-by: Claude <claude@Mac-mini.localdomain> Co-authored-by: Luke Kim <80174+lukekim@users.noreply.github.com>
1 parent 95cd794 commit 53c70c3

3 files changed

Lines changed: 336 additions & 14 deletions

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crates/data_components/src/debezium/arrow.rs

Lines changed: 143 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -169,14 +169,21 @@ pub fn append_value_to_struct_builder(
169169
builder: &mut StructBuilder,
170170
) -> Result<()> {
171171
builder.append(true);
172+
let null_value = serde_json::Value::Null;
172173

173174
for (idx, field) in builder.fields().iter().enumerate() {
174-
let Some(field_value) = value.get(field.name()) else {
175-
return MissingFieldInValueSnafu {
176-
field_name: field.name().clone(),
177-
value,
175+
// If the field is missing from the message (e.g. due to schema evolution),
176+
// append null for nullable fields instead of failing.
177+
let field_value = match value.get(field.name()) {
178+
Some(v) => v,
179+
None if field.is_nullable() => &null_value,
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None => {
181+
return MissingFieldInValueSnafu {
182+
field_name: field.name().clone(),
183+
value,
184+
}
185+
.fail();
178186
}
179-
.fail();
180187
};
181188

182189
let field_builder = builder.field_builder_array(idx);
@@ -698,4 +705,135 @@ mod tests {
698705
let result = convert_json_to_decimal(&input, 2);
699706
result.expect_err("Should fail for wrong JSON type");
700707
}
708+
709+
#[test]
710+
fn test_append_value_missing_nullable_field_fills_null() {
711+
use crate::arrow::struct_builder::StructBuilder;
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use arrow::array::Array;
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// Schema with one required and one nullable field
715+
let schema = Schema::new(vec![
716+
Field::new("id", DataType::Int32, false),
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Field::new("name", DataType::Utf8, true),
718+
]);
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720+
let mut builder = StructBuilder::from_fields(schema.fields().clone(), 1);
721+
722+
// Message is missing the nullable "name" field
723+
let value = json!({"id": 42});
724+
let result = append_value_to_struct_builder(value, &mut builder);
725+
assert!(
726+
result.is_ok(),
727+
"Should succeed when nullable field is missing"
728+
);
729+
730+
let struct_array = builder.finish();
731+
let record_batch: RecordBatch = struct_array.into();
732+
assert_eq!(record_batch.num_rows(), 1);
733+
734+
let id_col = record_batch
735+
.column_by_name("id")
736+
.expect("id column should exist")
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.as_any()
738+
.downcast_ref::<arrow::array::Int32Array>()
739+
.expect("id column should be Int32Array");
740+
assert_eq!(id_col.value(0), 42);
741+
742+
let name_col = record_batch
743+
.column_by_name("name")
744+
.expect("name column should exist")
745+
.as_any()
746+
.downcast_ref::<arrow::array::StringArray>()
747+
.expect("name column should be StringArray");
748+
assert!(name_col.is_null(0));
749+
}
750+
751+
#[test]
752+
fn test_append_value_missing_required_field_fails() {
753+
use crate::arrow::struct_builder::StructBuilder;
754+
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let schema = Schema::new(vec![
756+
Field::new("id", DataType::Int32, false),
757+
Field::new("status", DataType::Utf8, false), // not nullable
758+
]);
759+
760+
let mut builder = StructBuilder::from_fields(schema.fields().clone(), 1);
761+
762+
// Message is missing the required "status" field
763+
let value = json!({"id": 42});
764+
let result = append_value_to_struct_builder(value, &mut builder);
765+
assert!(
766+
result.is_err(),
767+
"Should fail when required field is missing"
768+
);
769+
}
770+
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#[test]
772+
fn test_append_value_extra_fields_ignored() {
773+
use crate::arrow::struct_builder::StructBuilder;
774+
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// Schema only has "id"
776+
let schema = Schema::new(vec![Field::new("id", DataType::Int32, false)]);
777+
778+
let mut builder = StructBuilder::from_fields(schema.fields().clone(), 1);
779+
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// Message has extra field "removed_column" not in schema
781+
let value = json!({"id": 42, "removed_column": "old_value"});
782+
let result = append_value_to_struct_builder(value, &mut builder);
783+
assert!(result.is_ok(), "Extra fields in message should be ignored");
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785+
let struct_array = builder.finish();
786+
let record_batch: RecordBatch = struct_array.into();
787+
assert_eq!(record_batch.num_rows(), 1);
788+
assert_eq!(record_batch.num_columns(), 1);
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}
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#[test]
792+
fn test_append_value_multiple_missing_nullable_fields() {
793+
use crate::arrow::struct_builder::StructBuilder;
794+
use arrow::array::Array;
795+
796+
// Schema with multiple nullable fields added via schema evolution
797+
let schema = Schema::new(vec![
798+
Field::new("id", DataType::Int32, false),
799+
Field::new("name", DataType::Utf8, true),
800+
Field::new("age", DataType::Int64, true),
801+
Field::new("active", DataType::Boolean, true),
802+
]);
803+
804+
let mut builder = StructBuilder::from_fields(schema.fields().clone(), 2);
805+
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// Old message with only "id" (before schema evolution)
807+
let old_value = json!({"id": 1});
808+
append_value_to_struct_builder(old_value, &mut builder)
809+
.expect("old message should process successfully");
810+
811+
// New message with all fields
812+
let new_value = json!({"id": 2, "name": "Alice", "age": 30, "active": true});
813+
append_value_to_struct_builder(new_value, &mut builder)
814+
.expect("new message should process successfully");
815+
816+
let struct_array = builder.finish();
817+
let record_batch: RecordBatch = struct_array.into();
818+
assert_eq!(record_batch.num_rows(), 2);
819+
820+
// First row: id=1, rest null
821+
let id_col = record_batch
822+
.column_by_name("id")
823+
.expect("id column should exist")
824+
.as_any()
825+
.downcast_ref::<arrow::array::Int32Array>()
826+
.expect("id column should be Int32Array");
827+
assert_eq!(id_col.value(0), 1);
828+
assert_eq!(id_col.value(1), 2);
829+
830+
let name_col = record_batch
831+
.column_by_name("name")
832+
.expect("name column should exist")
833+
.as_any()
834+
.downcast_ref::<arrow::array::StringArray>()
835+
.expect("name column should be StringArray");
836+
assert!(name_col.is_null(0));
837+
assert_eq!(name_col.value(1), "Alice");
838+
}
701839
}

crates/data_components/src/kafka.rs

Lines changed: 83 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -496,6 +496,84 @@ impl KafkaConsumer {
496496
})
497497
}
498498

499+
/// Fetch the latest message from a Kafka topic without affecting any existing
500+
/// consumer group state.
501+
///
502+
/// Creates a temporary consumer, seeks to the latest available message across
503+
/// all partitions, reads it, and returns the owned key/value pair.
504+
pub async fn fetch_latest_message<K: DeserializeOwned, V: DeserializeOwned>(
505+
topic: &str,
506+
kafka_config: &KafkaConfig,
507+
timeout: Duration,
508+
) -> Result<Option<(Option<K>, V)>> {
509+
let temp_group_id = format!("spice-schema-peek-{}", uuid::Uuid::new_v4());
510+
let mut peek_config = kafka_config.clone();
511+
peek_config.metrics_store = None; // Avoid skewing real consumer metrics
512+
let temp_consumer = Self::create(temp_group_id, &peek_config)?;
513+
514+
// Fetch topic metadata to discover partitions
515+
let metadata = temp_consumer
516+
.consumer
517+
.fetch_metadata(Some(topic), timeout)
518+
.context(UnableToRestartTopicSnafu {
519+
message: "Failed to fetch topic metadata".to_string(),
520+
})?;
521+
522+
let topic_metadata = metadata
523+
.topics()
524+
.iter()
525+
.find(|t| t.name() == topic)
526+
.context(MetadataTopicNotFoundSnafu {
527+
topic: topic.to_string(),
528+
})?;
529+
530+
// Find the partition with the highest watermark (most recent data)
531+
let mut best_partition: Option<(i32, i64)> = None;
532+
for partition in topic_metadata.partitions() {
533+
let (low, high) = temp_consumer
534+
.consumer
535+
.fetch_watermarks(topic, partition.id(), timeout)
536+
.context(UnableToRestartTopicSnafu {
537+
message: format!(
538+
"Failed to fetch watermarks for partition {}",
539+
partition.id()
540+
),
541+
})?;
542+
543+
if high > low {
544+
match &best_partition {
545+
Some((_, best_high)) if high <= *best_high => {}
546+
_ => best_partition = Some((partition.id(), high)),
547+
}
548+
}
549+
}
550+
551+
let Some((partition_id, high_watermark)) = best_partition else {
552+
return Ok(None); // No messages available
553+
};
554+
555+
// Manually assign the consumer to read from the latest offset
556+
let mut tpl = rdkafka::TopicPartitionList::new();
557+
tpl.add_partition_offset(topic, partition_id, Offset::Offset(high_watermark - 1))
558+
.context(UnableToRestartTopicSnafu {
559+
message: "Failed to configure partition offset".to_string(),
560+
})?;
561+
562+
temp_consumer
563+
.consumer
564+
.assign(&tpl)
565+
.context(UnableToRestartTopicSnafu {
566+
message: "Failed to assign partition".to_string(),
567+
})?;
568+
569+
// Read the message with a timeout
570+
match tokio::time::timeout(timeout, temp_consumer.next_json::<K, V>()).await {
571+
Ok(Ok(Some(msg))) => Ok(Some(msg.into_key_value())),
572+
Ok(Ok(None)) | Err(_) => Ok(None),
573+
Ok(Err(e)) => Err(e),
574+
}
575+
}
576+
499577
fn generate_group_id(dataset: &str) -> String {
500578
format!("spice.ai-{dataset}-{}", uuid::Uuid::new_v4())
501579
}
@@ -548,6 +626,11 @@ impl<'a, K, V> KafkaMessage<'a, K, V> {
548626
.store_offset_from_message(&self.msg)
549627
.context(UnableToCommitMessageSnafu)
550628
}
629+
630+
/// Consume the message and return owned key/value data.
631+
pub fn into_key_value(self) -> (Option<K>, V) {
632+
(self.key, self.value)
633+
}
551634
}
552635

553636
#[async_trait]

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