Improve API for VCF read_variant_stats() and read_allele_count() #8
Workflow file for this run
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| name: Run pre-commit | |
| on: | |
| pull_request: | |
| workflow_dispatch: | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-24.04 | |
| steps: | |
| - name: Checkout TileDB-VCF | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.12" | |
| - name: Restore pre-commit cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: ~/.cache/pre-commit | |
| key: pre-commit-ubuntu-24.04-3.12-${{ hashFiles('.github/workflows/lint-python.yml', '.pre-commit-config.yaml') }} | |
| - name: Install pre-commit | |
| run: pip -v install pre-commit | |
| - name: Log pip dependencies | |
| run: pip list | |
| - name: Run pre-commit hooks on all files | |
| run: pre-commit run -a -v |