LobsterGeneX is a React web application designed to visualise gene expression results from ten different tissue types from the European lobster (Homarus gammarus).
Tissue types analysed:
- Eye, Gill, Nerve, Muscle, Heart
- Hepatopancreas, Gut
- Ovary, Testes
- Juvenile
The gene annotation is available from EnsemblMetazoa. All results reserved. Article in preperation (Paris et al.). To launch the application, click the link below.
To view the count data click on one of the links below:
Normalised count data
VST count data
To launch the application click the link below:
www.lobstergenex.com
The app has been developed using ReactJS + Vite.
- Node.js (tested with v20.6.1)
- Node Package Manager (test with v9.8.1)
Clone repo:
git clone https://github.com/Tom-Jenkins/LobsterGeneX.git
cd LobsterGeneX/
Install node package versions from package.json:
npm install
Run application locally in developer mode:
npm run dev