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Merge pull request #2 from yixinmao/master
Code update/cleanup for HESS paper publication
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‎RVIC‎

‎control/gen_synthetic_meas/ArkRed/LAI_from_veglib/sm_0.5.prec_0.3.cfg‎

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# VIC image driver executable file
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exe = VIC/vic/drivers/image/vic_image.exe
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# MPI exe (this is absolute path!!!)
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mpi_exe = mpiexec.hydra
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mpi_exe = mpirun
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# VIC global template file
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vic_global_template = control/vic/ArkRed.Maurer_param.LAI_from_veglib/global.template.txt
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# Model step per day. This is VIC model running timestep

‎control/gen_synthetic_meas/ArkRed/LAI_from_veglib/sm_0.5.prec_1.cfg‎

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‎control/gen_synthetic_meas/small_basins/arkansas/LAI_from_veglib/sm_0.5.prec_0.3.cfg‎

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‎control/mocom/calib_v1/arkansas/global.template.calib_2015_2017.txt‎

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#######################################################################
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# VIC Model Parameters for Stehekin Basin Sample Image Driver Setup
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#######################################################################
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#######################################################################
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# Simulation Parameters
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#######################################################################
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MODEL_STEPS_PER_DAY 8 # number of model time steps in 24 hour period
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SNOW_STEPS_PER_DAY 8 # number of snow model time steps in 24 hour period
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RUNOFF_STEPS_PER_DAY 8 # number of runoff time steps in 24 hour period
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STARTYEAR 2015 # year model simulation starts
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STARTMONTH 01 # month model simulation starts
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STARTDAY 01 # day model simulation starts
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STARTSEC 0 # second model simulation starts
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ENDYEAR 2017
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ENDMONTH 12
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ENDDAY 31
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CALENDAR PROLEPTIC_GREGORIAN
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FULL_ENERGY FALSE # calculate full energy balance
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FROZEN_SOIL FALSE # calculate frozen soils
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#######################################################################
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#######################################################################
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# DOMAIN INFO
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#######################################################################
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DOMAIN /gscratch/hydro/ymao/data_assim/param/vic/small_basins/domain.arkansas.nc
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DOMAIN_TYPE LAT lat
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DOMAIN_TYPE LON lon
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DOMAIN_TYPE MASK mask
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DOMAIN_TYPE AREA area
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DOMAIN_TYPE FRAC frac
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DOMAIN_TYPE YDIM lat
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DOMAIN_TYPE XDIM lon
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######################################################################
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## State Files and Parameters
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########################################################################
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INIT_STATE $init_state
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#STATENAME $state_dir/state # Output state file path/prefix. The time (STATEYEAR,STATEMONTH,STATEDAY,STATESEC) will be appended to the prefix automatically in the format yyyymmdd.
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#STATEYEAR 2018 # year to save model state
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#STATEMONTH 01 # month to save model state
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#STATEDAY 01 # day to save model state
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#STATESEC 0 # second to save model state
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#STATE_FORMAT NETCDF4_CLASSIC # State file format, valid options: NETCDF3_CLASSIC, NETCDF3_64BIT_OFFSET, NETCDF4_CLASSIC, NETCDF4
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#######################################################################
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# Forcing Files and Parameters
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# netcdf forcing files will be of the form: <FORCING1>YYYY.nc
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#######################################################################
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FORCING1 /gscratch/hydro/ymao/data_assim/tools/prepare_vic_forcing/output/GPM_ArkRed/force_with_NLDAS2/small_basins/arkansas/force.
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FORCE_TYPE AIR_TEMP AIR_TEMP # Average air temperature, C
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FORCE_TYPE PREC PREC # Total precipitation (rain and snow), mm
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FORCE_TYPE PRESSURE PRESSURE # Atmospheric pressure, kPa
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FORCE_TYPE SWDOWN SHORTWAVE # Incoming shortwave, W/m2
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FORCE_TYPE LWDOWN LONGWAVE # Incoming longwave radiation, W/m2
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FORCE_TYPE VP VP # Vapor pressure, kPa
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FORCE_TYPE WIND WIND # Wind speed, m/s
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WIND_H 10.0 # height of wind speed measurement
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#######################################################################
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# Land Surface Files and Parameters
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#######################################################################
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PARAMETERS $param_nc
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BASEFLOW NIJSSEN2001 # ARNO or NIJSSEN2001
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NODES 3 # number of soil thermal nodes
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SNOW_BAND False
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#######################################################################
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# Output Files and Parameters
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#######################################################################
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RESULT_DIR $result_dir
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OUTFILE fluxes
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AGGFREQ NHOURS 3
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OUT_FORMAT NETCDF4
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COMPRESS 1
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#OUTVAR OUT_RAINF
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OUTVAR OUT_RUNOFF
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OUTVAR OUT_BASEFLOW
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#OUTVAR OUT_EVAP
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#OUTVAR OUT_SWE
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#OUTVAR OUT_SOIL_MOIST
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#OUTVAR OUT_SNOW_MELT

‎control/mocom/calib_v1/arkansas/global.template.spinup_2015_2017.txt‎

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#######################################################################
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# VIC Model Parameters for Stehekin Basin Sample Image Driver Setup
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#######################################################################
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#######################################################################
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# Simulation Parameters
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#######################################################################
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MODEL_STEPS_PER_DAY 8 # number of model time steps in 24 hour period
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SNOW_STEPS_PER_DAY 8 # number of snow model time steps in 24 hour period
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RUNOFF_STEPS_PER_DAY 8 # number of runoff time steps in 24 hour period
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STARTYEAR 2015 # year model simulation starts
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STARTMONTH 01 # month model simulation starts
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STARTDAY 01 # day model simulation starts
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STARTSEC 0 # second model simulation starts
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ENDYEAR 2017
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ENDMONTH 12
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ENDDAY 31
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CALENDAR PROLEPTIC_GREGORIAN
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FULL_ENERGY FALSE # calculate full energy balance
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FROZEN_SOIL FALSE # calculate frozen soils
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#######################################################################
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#######################################################################
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# DOMAIN INFO
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#######################################################################
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DOMAIN /gscratch/hydro/ymao/data_assim/param/vic/small_basins/domain.arkansas.nc
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DOMAIN_TYPE LAT lat
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DOMAIN_TYPE LON lon
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DOMAIN_TYPE MASK mask
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DOMAIN_TYPE AREA area
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DOMAIN_TYPE FRAC frac
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DOMAIN_TYPE YDIM lat
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DOMAIN_TYPE XDIM lon
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######################################################################
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## State Files and Parameters
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########################################################################
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INIT_STATE /gscratch/hydro/ymao/data_assim/output/vic/ArkRed/LAI_from_veglib/spinup.1979_2014.2014start/states/small_basins/state.2014start.20150101_00000.arkansas.nc
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STATENAME $state_dir/state # Output state file path/prefix. The time (STATEYEAR,STATEMONTH,STATEDAY,STATESEC) will be appended to the prefix automatically in the format yyyymmdd.
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STATEYEAR 2018 # year to save model state
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STATEMONTH 01 # month to save model state
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STATEDAY 01 # day to save model state
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STATESEC 0 # second to save model state
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STATE_FORMAT NETCDF4_CLASSIC # State file format, valid options: NETCDF3_CLASSIC, NETCDF3_64BIT_OFFSET, NETCDF4_CLASSIC, NETCDF4
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#######################################################################
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# Forcing Files and Parameters
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# netcdf forcing files will be of the form: <FORCING1>YYYY.nc
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#######################################################################
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FORCING1 /gscratch/hydro/ymao/data_assim/tools/prepare_vic_forcing/output/GPM_ArkRed/force_with_NLDAS2/small_basins/arkansas/force.
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FORCE_TYPE AIR_TEMP AIR_TEMP # Average air temperature, C
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FORCE_TYPE PREC PREC # Total precipitation (rain and snow), mm
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FORCE_TYPE PRESSURE PRESSURE # Atmospheric pressure, kPa
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FORCE_TYPE SWDOWN SHORTWAVE # Incoming shortwave, W/m2
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FORCE_TYPE LWDOWN LONGWAVE # Incoming longwave radiation, W/m2
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FORCE_TYPE VP VP # Vapor pressure, kPa
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FORCE_TYPE WIND WIND # Wind speed, m/s
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WIND_H 10.0 # height of wind speed measurement
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#######################################################################
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# Land Surface Files and Parameters
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#######################################################################
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PARAMETERS $param_nc
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BASEFLOW NIJSSEN2001 # ARNO or NIJSSEN2001
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NODES 3 # number of soil thermal nodes
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SNOW_BAND False
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#######################################################################
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# Output Files and Parameters
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#######################################################################
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RESULT_DIR $result_dir
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OUTFILE fluxes
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AGGFREQ NYEARS 1
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OUT_FORMAT NETCDF4
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COMPRESS 1
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OUTVAR OUT_RAINF
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OUTVAR OUT_RUNOFF
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OUTVAR OUT_BASEFLOW
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OUTVAR OUT_EVAP
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OUTVAR OUT_SWE
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OUTVAR OUT_SOIL_MOIST
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OUTVAR OUT_SNOW_MELT

‎control/mocom/calib_v1/arkansas/optimize.cfg‎

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[VIC]
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vic_exe = /gscratch/hydro/ymao/data_assim/VIC/vic/drivers/image/vic_image.exe
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mpi_exe = mpiexec.hydra
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mpi_proc = 1
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vic_param_nc_template = /gscratch/hydro/ymao/data_assim/param/vic/small_basins/param.arkansas.Maurer.LAI_from_veglib.nc
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# global template for running 2015-2017 as spinup of new parameters
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vic_global_template_spinup = /gscratch/hydro/ymao/data_assim/control/mocom/calib_v1/arkansas/global.template.spinup_2015_2017.txt
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# global template for running 2015-2017 for calibration statistics
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vic_global_template_calib = /gscratch/hydro/ymao/data_assim/control/mocom/calib_v1/arkansas/global.template.calib_2015_2017.txt
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[RVIC]
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rvic_convolve_template = /gscratch/hydro/ymao/data_assim/control/mocom/calib_v1/arkansas/rvic.convolve.template.cfg
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# Time lag between VIC/RVIC forcing and USGS local time [hour]
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time_lag = 6
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# Site name in RVIC
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site = arkansas
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[USGS]
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# --- USGS streamflow data --- #
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usgs_data_txt = /gscratch/hydro/ymao/data_assim/data/USGS/Crow_2017/sites_in_ArkRed/07144200.txt
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[TIME]
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# --- Time period for calculating statistics --- #
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start_time = 2015-03-31-00
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end_time = 2017-12-30-21
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