Merge pull request #278 from UW-Macrostrat/fix-page-styles

Fix page styles

Author: davenquinn

.github/ISSUE_TEMPLATE/ingestion.md

@@ -1,14 +1,12 @@
 ---
 name: Ingestion Update
 about: Create a report to help us improve
-title: ''
+title: ""
 labels: map-ingestion-interface
-assignees: ''
-
+assignees: ""
 ---
 
 - [ ] Bug
 - [ ] Feature Request
 
 **Description**
-

.github/workflows/build-image.yaml

@@ -4,16 +4,16 @@ permissions: read-all
 
 on:
   push:
-    branches: [ "main" ]
+    branches: ["main"]
     tags:
-      - 'v*.*.*' # glob for semver tags (including prereleases)
+      - "v*.*.*" # glob for semver tags (including prereleases)
   pull_request:
-    branches: [ main ]
+    branches: [main]
 
 jobs:
   call-build-image:
     uses: UW-Macrostrat/build-push/.github/workflows/build-push.yaml@main
     secrets: inherit
     with:
       context: .
-      image: 'hub.opensciencegrid.org/macrostrat/web'
+      image: "hub.opensciencegrid.org/macrostrat/web"

.prettierignore

@@ -1 +1,6 @@
 *.mdx
+.yarn
+.idea
+.vscode
+dist
+content/.obsidian

README.md

@@ -1,31 +1,38 @@
 # Macrostrat's map interface
 
-Macrostrat's map interface is web portal to a geologic model of the Earth's crust.
+Macrostrat's map interface is web portal to a geologic model of the Earth's
+crust.
 
-Version 5 of the application transitions to using [Vite](https://vitejs.dev/) for bundling and [Vike](https://vike.dev/)
-for server-side rendering. We are working on updating this version for performance and stability.
+Version 5 of the application transitions to using [Vite](https://vitejs.dev/)
+for bundling and [Vike](https://vike.dev/) for server-side rendering. We are
+working on updating this version for performance and stability.
 
 ## Installation for local development
 
 1. Clone the repository
 2. Pull down submodules (`git submodule update --init --recursive`)
-3. Create and populate a `.env` file with the appropriate environment variables (See [
-   `.env.example`](https://github.com/UW-Macrostrat/web/blob/main/.env.example) for more information.)
-4. Verify that you have access to recent versions of Node.js and the Yarn package manager ( `node >= 16.0.0` and
-   `yarn >= 4.0.0`; run `node -v` and `yarn -v` to check)
+3. Create and populate a `.env` file with the appropriate environment variables
+   (See
+   [ `.env.example`](https://github.com/UW-Macrostrat/web/blob/main/.env.example)
+   for more information.)
+4. Verify that you have access to recent versions of Node.js and the Yarn
+   package manager ( `node >= 16.0.0` and `yarn >= 4.0.0`; run `node -v` and
+   `yarn -v` to check)
 5. Run `yarn install` to update packages
-6. Start the live-reloading development server with `yarn run dev`. The server will be available at
-   `http://localhost:3000` by default.
+6. Start the live-reloading development server with `yarn run dev`. The server
+   will be available at `http://localhost:3000` by default.
 
 ## Contributing
 
-Please see the [Contributing guide](./CONTRIBUTING.md) for information on how to contribute to this codebase.
+Please see the [Contributing guide](./CONTRIBUTING.md) for information on how to
+contribute to this codebase.
 
 ## Packaging
 
 ### Running locally with Docker
 
-Spins up a instance of the website for development on the same node image used for prod.
+Spins up a instance of the website for development on the same node image used
+for prod.
 
 ```bash
 docker run -it -p 3010:3000 -v $(pwd):/app -w /app node:20 git config --global --add safe.directory /app && yarn run dev
@@ -57,15 +64,16 @@ To deploy to kubernetes there is two steps.
 
 2. Update the deployment in Kubernetes
 
-   You do this by updating the image tag here to whatever you tagged
-   above: https://github.com/UW-Macrostrat/tiger-macrostrat-config/blob/main/manifests/development/web/deployment-patch.yaml
+   You do this by updating the image tag here to whatever you tagged above:
+   https://github.com/UW-Macrostrat/tiger-macrostrat-config/blob/main/manifests/development/web/deployment-patch.yaml
 
 ## Testing authentication on localhost
 
-If you are developing locally and need to test authentication, you can
-use a browser extension like **CookieSync** to automatically pull cookies from the production or development
-site into your local environment. This will allow you to use the same session
-information locally. The cookie that must be copied is called `access_token`.
+If you are developing locally and need to test authentication, you can use a
+browser extension like **CookieSync** to automatically pull cookies from the
+production or development site into your local environment. This will allow you
+to use the same session information locally. The cookie that must be copied is
+called `access_token`.
 
 We will eventually build an enhanced authentication service to allow for easier
 local development.
@@ -74,4 +82,3 @@ local development.
 MACROSTRAT_API_PROXY_DOMAIN="https://dev2.macrostrat.org"
 VITE_MACROSTRAT_API_DOMAIN="http://localhost:3000"
 ```
-

content/Architecture.md

@@ -1,5 +1,5 @@
 - Macrostrat is centered around a [[PostgreSQL]] database
-    - A "database-centric" application
+  - A "database-centric" application
 
 ## Architectural models
 

content/Community.md

@@ -3,8 +3,8 @@ Macrostrat is part of a broad geoinformatics ecosystem.
 ## Geological systems
 
 - Paleobiology database (PBDB): [https://paleobiodb.org](https://paleobiodb.org)
-- The [EarthByte](https://www.earthbyte.org) group is engaged in many complementary activities towards building a
-  digital crust
+- The [EarthByte](https://www.earthbyte.org) group is engaged in many
+  complementary activities towards building a digital crust
 
 ## Cool Earth observing websites
 

content/Components/Macrostrat data services.md

@@ -3,16 +3,20 @@ geologic column data.
 
 There are two main reasons for this:
 
-1. Macrostrat currently contains voluminous geologic map and column data that cannot be accessed in aggregate anywhere
-   else.
-    - Over 300 different geologic maps, containing more than 2.5 million rock unit polygons covering the world, have
-      been integrated into a single, unified, queryable environment in Macrostrat.
-    - Additionally, more than 35,000 rock units from over 1,500 regional columns covering all of North America and
-      limited other regions are publicly available.
-2. Macrostrat has a public "REST" application programming interface (API) that makes the full complement of data
-   available in Findable, Accessible, Interoperable, and Reusable (FAIR) fashion with a CC-BY license.
+1. Macrostrat currently contains voluminous geologic map and column data that
+   cannot be accessed in aggregate anywhere else.
+   - Over 300 different geologic maps, containing more than 2.5 million rock
+     unit polygons covering the world, have been integrated into a single,
+     unified, queryable environment in Macrostrat.
+   - Additionally, more than 35,000 rock units from over 1,500 regional columns
+     covering all of North America and limited other regions are publicly
+     available.
+2. Macrostrat has a public "REST" application programming interface (API) that
+   makes the full complement of data available in Findable, Accessible,
+   Interoperable, and Reusable (FAIR) fashion with a CC-BY license.
 
-Many third-party applications and users take advantage of Macrostrat data services:
+Many third-party applications and users take advantage of Macrostrat data
+services:
 
 - Mancos
 - StraboSpot
@@ -24,8 +28,11 @@ Many third-party applications and users take advantage of Macrostrat data servic
 
 ## Usage
 
-Macrostrat’s data services have become impactful community resources for geologic information:
+Macrostrat’s data services have become impactful community resources for
+geologic information:
 
-- Our geologic map server has served more than 2 billion tile requests since logging began in 2018 (~10 per second)
-- Over the last 28 days, our other data APIs have served 3.8 million requests (~2 per second).
+- Our geologic map server has served more than 2 billion tile requests since
+  logging began in 2018 (~10 per second)
+- Over the last 28 days, our other data APIs have served 3.8 million requests
+  (~2 per second).
 - Conservatively, these amount to 100,000 requests for information each day.

content/Components/Macrostrat lexicon.md

@@ -1,4 +1,5 @@
-Macrostrat maintains a lexicon of geologic information, such as stratigraphic units, etc.
+Macrostrat maintains a lexicon of geologic information, such as stratigraphic
+units, etc.
 
 ## Concepts
 
@@ -10,12 +11,14 @@ Macrostrat maintains a lexicon of geologic information, such as stratigraphic un
 ## Mechanics
 
 - This lexicon integrates curated information from a variety of publishers
-    - Notably the USGS Stratigraphic Names lexicon
-    - Also lexicons from other organizations
-- Linked to from map and column descriptive information (mostly using autogenerated scripts)
-- The capability to manage geologic names and concepts is not unique but the tools on top of it are
+  - Notably the USGS Stratigraphic Names lexicon
+  - Also lexicons from other organizations
+- Linked to from map and column descriptive information (mostly using
+  autogenerated scripts)
+- The capability to manage geologic names and concepts is not unique but the
+  tools on top of it are
 
 ## Resources
 
 - https://ngmdb.usgs.gov/Geolex/stratres/lexicons
-- [USGS Geolex Search](https://ngmdb.usgs.gov/Geolex/search)
+- [USGS Geolex Search](https://ngmdb.usgs.gov/Geolex/search)

content/Components/Macrostrat stratigraphic columns.md

@@ -1,3 +1,4 @@
-- Representation of stratigraphy in chronostratigraphic or lithostratigraphic context
+- Representation of stratigraphy in chronostratigraphic or lithostratigraphic
+  context
 - Provided by [[Macrostrat data services]]
-- Will soon be viewable in [[Macrostrat user interfaces]]
+- Will soon be viewable in [[Macrostrat user interfaces]]

content/Components/Macrostrat user interfaces.md

@@ -1,9 +1,11 @@
-[[Macrostrat]] user interfaces seek to express the world as geologists are used to seeing it
+[[Macrostrat]] user interfaces seek to express the world as geologists are used
+to seeing it
 
 ## Core components
 
 - Maps
 - Stratigraphic columns
-- Summary pages for geologic entities (units, samples, geochemical datasets, etc.)
+- Summary pages for geologic entities (units, samples, geochemical datasets,
+  etc.)
 
 Based on [[Macrostrat data services]]