feat: add keybinds settings modal, auto-delete expired timers, and bump version to v0.5.6

Author: VariableThe

AUDIT_LOG.md

@@ -2,6 +2,20 @@
 
 This log tracks all significant changes, updates, and versions in the PaperCache project.
 
+## 2026-06-28 (v0.5.6 Release: Keybinds Modal, Shortcut Mappings, Timer Auto-Delete, and Graph Link Refinement)
+**Change:** chore(release): bump version to 0.5.6; feat(shortcuts): add dedicated keybinds settings modal and update global hotkeys (`Cmd+R` for tasks, `Cmd+T` for timers); feat(timers): auto-delete expired timers after 5 seconds; feat(graph): support standard markdown links and wikilinks
+
+**Details/Why:**
+1. **Version Bump**: Bumped application version to 0.5.6 across `package.json`, `Cargo.toml`, `tauri.conf.json`, and added release notes file `New Features in v0.5.6.md`.
+2. **Keybinds Settings Panel**: Created `ShortcutInput.tsx` as a shared component and `KeybindsModal.tsx` as a dedicated settings panel for remapping shortcuts, accessible via Settings. Added new storage keys in `settingsKeys.ts` and updated `useGlobalHotkey.ts` to dynamically match keyboard events against customizable shortcut settings. Refined UI layout so keycaps are centered horizontally and the container/buttons match the main Settings window.
+3. **Keybind Updates**: Updated default shortcuts so `Cmd+R` opens Tasks/Reminders and `Cmd+T` opens the countdown Timers panel, aligning with user navigation habits.
+4. **Timer Auto-Deletion**: Updated `useTimerStore.ts` and `App.tsx` so that when a countdown timer completes, it schedules a targeted 5-second `setTimeout` to call `removeTimer(id)`, reducing UI clutter. Moved backend `timer-complete` event listener to `App.tsx` so completion notifications and auto-cleanup function globally even when the panel is closed.
+5. **Graph View Link Parsing**: Expanded regex detection in `GraphView.tsx` to link notes using standard markdown links (`[Title](Title.md)`) and wikilinks (`[[Title]]`) in addition to `/file` links, and added z-axis centering forces (`centerZ`, `folderZ`) for improved 3D layout stability.
+
+**Files changed:** `package.json`, `src-tauri/Cargo.toml`, `src-tauri/tauri.conf.json`, `notes/New Features in v0.5.6.md`, `src/lib/settingsKeys.ts`, `src/components/ShortcutInput.tsx`, `src/components/KeybindsModal.tsx`, `src/store/useAppStore.ts`, `src/App.tsx`, `src/Settings.tsx`, `src/hooks/useGlobalHotkey.ts`, `src/store/useTimerStore.ts`, `src/components/TimersPage.tsx`, `src/GraphView.tsx`, `CHANGELOG.md`, `AUDIT_LOG.md`.
+
+---
+
 ## 2026-06-27 (API Key Persistence & Graph View Fixes)
 **Change:** fix(ai): fix API key saving/clearing logic and macOS keychain credential updating; fix(graph): prevent `fg.graphData` crashes when opening or closing Graph View
 

CHANGELOG.md

@@ -5,6 +5,16 @@ All notable, user-facing changes to PaperCache will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [v0.5.6] - 2026-06-28
+
+### Added
+- **Dedicated Keybinds Settings Panel**: Added a sleek, high-contrast dark modal accessible from Settings (`Cmd+Shift+S`) to view and remap all application shortcuts with live recording. Designed with rich typography, glassmorphic cards, and fixed-width input buttons for perfectly vertically aligned shortcut columns.
+
+### Changed
+- **Updated Default Shortcut Mappings**: Shifted the Reminders/Tasks view shortcut to `Cmd+R` and Timers panel shortcut to `Cmd+T`.
+- **Timer Auto-Deletion**: Expired countdown timers are now automatically removed from the active list 5 seconds after completing, keeping the UI clean. Timer completion notifications and auto-cleanup now function globally even when the Timers panel is closed.
+- **Enhanced Graph View Link Parsing**: Extended 3D Graph View link detection to support standard markdown links (`[Note](Note.md)`) and wikilinks (`[[Note]]`) alongside the existing `/file` syntax, and added z-axis forces for improved 3D layout stability.
+
 ## [v0.5.5] - 2026-06-27
 
 ### Added

notes/New Features in v0.5.6.md

@@ -0,0 +1,11 @@
+# New Features in v0.5.6
+
+Welcome to PaperCache v0.5.6!
+
+Here are the new features and improvements implemented in this release:
+- **Dedicated Keybinds Settings Panel**: Added a dedicated modal accessible from Settings (`Cmd+Shift+S`) to view and remap all application shortcuts with live keyboard shortcut recording. Designed with rich typography, centered 3D keycaps, and uniform layouts that seamlessly unify with the main Settings panel.
+- **Updated Default Shortcut Mappings**: Shifted the Reminders/Tasks view shortcut to `Cmd+R` and open Timers panel shortcut to `Cmd+T` for faster, ergonomic navigation.
+- **Automatic Timer Cleanup**: Completed countdown timers are now automatically removed from the active list 5 seconds after expiration, keeping your workspace uncluttered. Timer completion notifications and auto-cleanup function globally even when the Timers panel is closed.
+- **Expanded Graph View Link Detection**: Extended 3D Graph View link parsing to support standard markdown links (`[Note](Note.md)`) and wikilinks (`[[Note]]`) alongside `/file` links, with enhanced z-axis centering forces for improved 3D layout stability.
+
+*(If you have read this note, feel free to delete it)*

package.json

@@ -1,7 +1,7 @@
 {
   "name": "papercache",
   "private": true,
-  "version": "0.5.5",
+  "version": "0.5.6",
   "type": "module",
   "scripts": {
     "dev": "vite",

src-tauri/Cargo.toml

@@ -1,6 +1,6 @@
 [package]
 name = "papercache"
-version = "0.5.5"
+version = "0.5.6"
 description = "A PaperCache Tauri App"
 authors = ["Aditya Sharma"]
 edition = "2021"

src-tauri/tauri.conf.json

@@ -1,7 +1,7 @@
 {
   "$schema": "https://schema.tauri.app/2.0.0/tauri.schema.json",
   "productName": "PaperCache",
-  "version": "0.5.5",
+  "version": "0.5.6",
   "identifier": "com.variablethe.papercache",
   "build": {
     "beforeDevCommand": "npm run dev",

src/App.tsx

@@ -5,9 +5,12 @@ import './App.css'
 const GraphView = lazy(() => import('./GraphView'))
 import { RemindersPage } from './components/RemindersPage'
 import { TimersPage } from './components/TimersPage'
+import { KeybindsModal } from './components/KeybindsModal'
 
 import { useAppStore } from './store/useAppStore'
 import { useSettingsStore } from './store/useSettingsStore'
+import { useTimerStore } from './store/useTimerStore'
+import { listen } from '@tauri-apps/api/event'
 
 import { useNoteStorage } from './hooks/useNoteStorage'
 import { useVariables } from './hooks/useVariables'
@@ -37,6 +40,8 @@ function App() {
   const setShowMainActionMenu = useAppStore((state) => state.setShowMainActionMenu)
   const showSettingsModal = useAppStore((state) => state.showSettingsModal)
   const setShowSettingsModal = useAppStore((state) => state.setShowSettingsModal)
+  const showKeybindsModal = useAppStore((state) => state.showKeybindsModal)
+  const setShowKeybindsModal = useAppStore((state) => state.setShowKeybindsModal)
 
   const { themePreset, fontFamily, showRulings, bgType, bgColor, bgImage, textColor, numColor } =
     useSettingsStore()
@@ -65,8 +70,24 @@ function App() {
         type: 'info',
       })
     })
+
+    useTimerStore.getState().cleanExpiredTimers()
+
+    let unlistenTimer: (() => void) | undefined
+    listen<string>('timer-complete', (event) => {
+      const id = event.payload
+      useTimerStore.getState().completeTimer(id)
+      const t = useTimerStore.getState().timers.find((x) => x.id === id)
+      useAppStore
+        .getState()
+        .addToast({ message: `⏱ Timer done: ${t?.label || ''}`, type: 'success' })
+    }).then((fn) => {
+      unlistenTimer = fn
+    })
+
     return () => {
       disposeUpdateReady()
+      unlistenTimer?.()
     }
   }, [])
 
@@ -231,7 +252,8 @@ function App() {
             left: 0,
             right: 0,
             bottom: 0,
-            backgroundColor: bgType === 'color' ? bgColor : '#1a1a1a',
+            backgroundColor: 'rgba(0, 0, 0, 0.75)',
+            backdropFilter: 'blur(5px)',
             zIndex: 9999,
             overflow: 'auto',
           }}
@@ -240,6 +262,25 @@ function App() {
         </div>
       )}
 
+      {showKeybindsModal && (
+        <div
+          onClick={(e) => e.stopPropagation()}
+          style={{
+            position: 'fixed',
+            top: 0,
+            left: 0,
+            right: 0,
+            bottom: 0,
+            backgroundColor: 'rgba(0, 0, 0, 0.75)',
+            backdropFilter: 'blur(5px)',
+            zIndex: 10000,
+            overflow: 'auto',
+          }}
+        >
+          <KeybindsModal onClose={() => setShowKeybindsModal(false)} />
+        </div>
+      )}
+
       {/* In-app toast notifications */}
       {toasts.length > 0 && (
         <div

src/GraphView.tsx

@@ -32,8 +32,10 @@ interface GraphLink {
   target: string
 }
 
-function buildFolderCentroids(folderNames: string[]): Map<string, { cx: number; cy: number }> {
-  const centroids = new Map<string, { cx: number; cy: number }>()
+function buildFolderCentroids(
+  folderNames: string[]
+): Map<string, { cx: number; cy: number; cz: number }> {
+  const centroids = new Map<string, { cx: number; cy: number; cz: number }>()
   const n = folderNames.length
   if (n === 0) return centroids
   const radius = 60
@@ -42,6 +44,7 @@ function buildFolderCentroids(folderNames: string[]): Map<string, { cx: number;
     centroids.set(folder, {
       cx: radius * Math.cos(angle),
       cy: radius * Math.sin(angle),
+      cz: (i % 2 === 0 ? 1 : -1) * (15 * (i % 3)),
     })
   })
   return centroids
@@ -141,15 +144,39 @@ export default function GraphView({
     const nodeIds = new Set(nodes.map((n) => n.id))
 
     notes.forEach((note) => {
-      const re = /\]\(\/file\s+([^)]+)\)/g
+      const targets = new Set<string>()
+
+      // 1. Match ](/file <path>)
+      const reFile = /\]\(\/file\s+([^)]+)\)/g
       let match
-      while ((match = re.exec(note.content)) !== null) {
+      while ((match = reFile.exec(note.content)) !== null) {
+        let targetId = match[1].trim().replace(/\\/g, '/')
+        if (!targetId.endsWith('.md')) targetId += '.md'
+        targets.add(targetId)
+      }
+
+      // 2. Match ](<path>.md)
+      const reMd = /\]\(([^)]+\.md)\)/g
+      while ((match = reMd.exec(note.content)) !== null) {
+        let targetId = match[1].trim().replace(/\\/g, '/')
+        if (targetId.startsWith('./')) targetId = targetId.slice(2)
+        if (targetId.startsWith('/')) targetId = targetId.slice(1)
+        targets.add(targetId)
+      }
+
+      // 3. Match [[<title>]]
+      const reWiki = /\[\[([^\]]+)\]\]/g
+      while ((match = reWiki.exec(note.content)) !== null) {
         let targetId = match[1].trim().replace(/\\/g, '/')
         if (!targetId.endsWith('.md')) targetId += '.md'
-        if (nodeIds.has(targetId)) {
+        targets.add(targetId)
+      }
+
+      targets.forEach((targetId) => {
+        if (nodeIds.has(targetId) && targetId !== note.id) {
           links.push({ source: note.id, target: targetId })
         }
-      }
+      })
     })
 
     return { nodes, links }