test pass locally on nix build #18
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| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| name: R CMD Check | |
| permissions: read-all | |
| jobs: | |
| check-package: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libcurl4-openssl-dev libbz2-dev liblzma-dev zlib1g-dev libglpk-dev pandoc texlive-latex-recommended texlive-latex-extra | |
| - name: Install R dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: | | |
| any::rcmdcheck | |
| cran::BiocManager | |
| upgrade: 'TRUE' | |
| - name: Run checks | |
| uses: r-lib/actions/check-r-package@v2 |