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feat: add seasonal support and prepare v0.2.0 release
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Cargo.lock

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Cargo.toml

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[package]
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name = "causal_impact_core"
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version = "0.1.0"
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version = "0.2.0"
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edition = "2021"
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[lib]

README.md

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@@ -71,9 +71,9 @@ fig.savefig("causal_impact.png")
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| Algorithm | Gibbs (bsts/C++) | Gibbs (Rust) | TFP-based | VI default / HMC | MLE (statsmodels) |
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| Dependencies | R, bsts | numpy, pandas, matplotlib | TF, TFP (3 GB+) | TF, TFP (3 GB+) | statsmodels |
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| Spike-and-slab | Yes | Yes | Unknown | No | No |
74-
| Seasonal component | Yes | Planned | Unknown | Yes (TFP STS) | No |
74+
| Seasonal component | Yes | Yes (`nseasons`, `season_duration`) | Unknown | Yes (TFP STS) | No |
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| Dynamic regression | Yes | Planned | Unknown | No | No |
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| R numerical test | Reference | CI-enforced (±1.5%) | Not published | Visual comparison | Not tested |
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| R numerical test | Reference | CI-enforced | Not published | Visual comparison | Not tested |
7777
| Speed (T=1000) | 2.1 s | 0.07 s (30x) | Seconds | Minutes (HMC: hours) | Sub-second |
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| Python version | N/A (R) | 3.10+ | 3.8+ | 3.7-3.11 | 3.6-3.8 (stale) |
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| Last release | Active | Active | 2023 | 2025-01 | 2020-05 |
@@ -87,21 +87,22 @@ Existing Python ports have fundamental limitations:
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- tfp-causalimpact (Google's own Python port) does not publish numerical equivalence tests with R
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- None of the above implement spike-and-slab variable selection matching R's bsts
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This library reproduces the exact Gibbs sampler from R's bsts package in Rust, with CI-enforced numerical equivalence tests on every commit.
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This library reproduces the core Gibbs-sampler workflow from R's bsts package in Rust, with CI-enforced numerical equivalence tests on every commit.
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## Numerical Equivalence with R
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Verified against R CausalImpact 1.4.1 (bsts) across 4 scenarios (basic, covariates, strong_effect, no_effect).
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Verified against R CausalImpact 1.4.1 (bsts) across 5 scenarios
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(`basic`, `covariates`, `strong_effect`, `no_effect`, `seasonal`).
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Tests run on every commit with seed-fixed MCMC for deterministic reproduction.
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### Current status
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| Metric | no-covariates | covariates | Justification |
100-
|---|---|---|---|
101-
| `point_effect_mean` | ±3% | xfail | MCMC sampling variance with independent RNG |
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| `cumulative_effect_total` | ±3% | xfail | Same ratio as point effect |
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| `ci_lower` / `ci_upper` | ±1.5% | ±10% | See R parity status below |
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| `p_value` | Significance match | Significance match | Classification at alpha=0.05 |
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| Metric | Status | Notes |
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|---|---|---|
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| `point_effect_mean` | ±3% relative | Passing on core scenarios |
103+
| `cumulative_effect_total` | ±3% relative | Passing on core scenarios |
104+
| `ci_lower` / `ci_upper` | Tight parity | `±1.5%` no-covariates, `±1%` covariates, explicit Phase 2 acceptance `±3%`, seasonal fixture `±5%` |
105+
| `p_value` | Significance match | Classification at alpha=0.05 |
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### What is matching R and what is not
107108

@@ -112,15 +113,15 @@ Tests run on every commit with seed-fixed MCMC for deterministic reproduction.
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| Post-period Random Walk propagation | Matching | Forward simulation from last pre-period state |
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| Data standardization (standardize.data=TRUE) | Matching | (y - mean) / sd using pre-period moments |
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| prior.level.sd = 0.01 | Matching | Same default, same semantics |
115-
| Spike-and-slab variable selection | Partial | Coordinate-wise sampling works; prior parameters (expected.r2, prior.df) not yet matched |
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| expected.model.size = 3 (R default) | Partial | Implemented but defaults to 1; R defaults to 3 |
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| expected.r2 = 0.8, prior.df = 50 | Not yet | Slab variance uses g-prior instead of R's R2-based prior |
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| Seasonal component (nseasons) | Planned | R supports AddSeasonal; not yet implemented |
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| Spike-and-slab variable selection | Partial | Coordinate-wise sampling works; prior parameters (expected.r2, prior.df) are approximate |
117+
| expected.model.size | Partial | `CausalImpact` preserves the legacy default `2`; `ModelOptions` keeps explicit default `1` |
118+
| expected.r2 = 0.8, prior.df = 50 | Partial | Static regression prior is tuned for close R parity, not a byte-for-byte port |
119+
| Seasonal component (`nseasons`, `season_duration`) | Supported | R-compatible API with seasonal fixture coverage |
119120
| Dynamic regression | Planned | R supports dynamic.regression=TRUE; not yet implemented |
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| Local linear trend | Planned | R uses AddLocalLevel only by default; trend option exists but not ported |
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122-
The ±10% gap in the covariates scenario comes from the missing R2-based slab prior (expected.r2=0.8, prior.df=50).
123-
This is tracked as Phase 2 work.
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Covariate CI bounds are enforced twice: the legacy parity fixture remains tighter than
124+
Phase 2 requirements, and a separate Phase 2 acceptance test keeps the threshold at `±3%`.
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## API
126127

@@ -144,7 +145,9 @@ This is tracked as Phase 2 work.
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| `seed` | 0 | Random seed for reproducibility |
145146
| `prior_level_sd` | 0.01 | Prior standard deviation for the local level |
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| `standardize_data` | `True` | Standardize data before fitting |
147-
| `expected_model_size` | 1 | Expected number of active covariates (spike-and-slab prior) |
148+
| `expected_model_size` | 2 | Expected number of active covariates (spike-and-slab prior); `ModelOptions` keeps `1` |
149+
| `nseasons` | `None` | Optional seasonal cycle count (R-compatible API) |
150+
| `season_duration` | `None` | Optional duration of each seasonal block; defaults to `1` when `nseasons` is set |
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149152
#### Methods and Properties
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docs/compatibility-matrix.md

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@@ -8,7 +8,7 @@ Comparison of features between R CausalImpact (bsts 1.4.1) and this Python imple
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|---|---|---|---|
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| Local level | Yes | Yes | Identical algorithm |
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| Local linear trend | Yes | No | Not yet implemented |
11-
| Seasonality | Yes | No | Use Fourier covariates as workaround |
11+
| Seasonality | Yes | Yes | R-compatible API with seasonal fixture coverage |
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| Dynamic regression | Yes | No | Not yet implemented |
1313
| Regression (static) | Yes | Yes | Identical algorithm |
1414

@@ -17,11 +17,11 @@ Comparison of features between R CausalImpact (bsts 1.4.1) and this Python imple
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| Parameter | R | Python | Notes |
1818
|---|---|---|---|
1919
| niter | Yes | Yes | Same default (1000) |
20-
| nseasons | Yes | No | - |
21-
| season.duration | Yes | No | - |
20+
| nseasons | Yes | Yes | `ModelOptions.nseasons` or `model_args["nseasons"]` |
21+
| season.duration | Yes | Yes | `ModelOptions.season_duration` or `model_args["season.duration"]` |
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| prior.level.sd | Yes | Yes | Same default (0.01) |
2323
| standardize.data | Yes | Yes | Same default (True) |
24-
| expected.model.size | Yes | Yes | Same default (1) |
24+
| expected.model.size | Yes | Yes | Legacy `CausalImpact` default is 2; `ModelOptions` keeps 1 |
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## Warmup Semantics
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@@ -70,7 +70,7 @@ Comparison of features between R CausalImpact (bsts 1.4.1) and this Python imple
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|---|---|---|
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| point_effect_mean | ±3% relative | Passing |
7272
| cumulative_effect_total | ±3% relative | Passing |
73-
| ci_lower / ci_upper | ±15% relative | Passing |
73+
| ci_lower / ci_upper | Tight parity (`±1.5%` no-cov, `±1%` covariates, `±5%` seasonal) | Passing |
7474
| p_value significance | Match at alpha=0.05 | Passing |
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Tests run against R CausalImpact 1.4.1 fixtures on every PR.

docs/migration-from-r.md

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@@ -39,11 +39,11 @@ fig = ci.plot()
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| R (model.args) | Python (model_args / ModelOptions) | Default |
4040
|---|---|---|
4141
| `niter` | `niter` | 1000 |
42-
| `nseasons` | Not supported | - |
43-
| `season.duration` | Not supported | - |
42+
| `nseasons` | `nseasons` | `None` |
43+
| `season.duration` | `season_duration` or `model_args["season.duration"]` | `1` when `nseasons` is set |
4444
| `prior.level.sd` | `prior_level_sd` | 0.01 |
4545
| `standardize.data` | `standardize_data` | True |
46-
| `expected.model.size` | `expected_model_size` | 1 |
46+
| `expected.model.size` | `expected_model_size` | 2 in `CausalImpact`; `ModelOptions` keeps 1 |
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4848
## Data Format
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@@ -81,13 +81,12 @@ Key differences:
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8282
## Numerical Equivalence
8383

84-
This library verifies ±3% agreement with R CausalImpact on point estimates and cumulative effects across multiple test scenarios. Tests run on every PR.
84+
This library verifies ±3% agreement with R CausalImpact on point estimates and cumulative effects across multiple test scenarios, including a seasonal fixture. Tests run on every PR.
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8686
Differences arise from independent RNG implementations (R's `set.seed` vs Rust's `ChaCha8Rng`), not from algorithmic differences.
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8888
## What Is Not Supported
8989

90-
- Seasonal state components (`nseasons`, `season.duration`)
9190
- Custom bsts model objects
9291
- `model.args$dynamic.regression`
9392

docs/migration-from-tfp.md

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ci = CausalImpact(data, pre_period, post_period, model_args={"niter": 1000})
7575
```
7676

77-
Note: `bsts-causalimpact` does not support seasonal components (`nseasons`) in the current version. If your analysis requires seasonality, you need to handle it via covariates (e.g., Fourier terms).
77+
`bsts-causalimpact` supports `nseasons` and `season_duration` directly:
78+
79+
```python
80+
ci = CausalImpact(
81+
data,
82+
pre_period,
83+
post_period,
84+
model_args={"nseasons": 7, "season_duration": 1},
85+
)
86+
```
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7988
### Output Access
8089

@@ -88,7 +97,6 @@ Note: `bsts-causalimpact` does not support seasonal components (`nseasons`) in t
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8998
### What Is Not Supported
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91-
- Seasonal state components
92100
- Custom prior specification beyond `prior_level_sd`
93101
- TensorFlow-based model customization
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pyproject.toml

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[project]
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name = "bsts-causalimpact"
7-
version = "0.1.0"
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version = "0.2.0"
88
description = "CausalImpact for Python with Rust Gibbs sampler (R-compatible)"
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requires-python = ">=3.10"
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dependencies = [

python/causal_impact/main.py

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2424
"seed": 0,
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"standardize_data": True,
2626
"prior_level_sd": 0.01,
27-
"expected_model_size": 1,
27+
"expected_model_size": 2,
28+
"nseasons": None,
29+
"season_duration": None,
2830
}
2931

3032

33+
def _normalize_model_args(
34+
model_args: dict | ModelOptions | None,
35+
) -> dict:
36+
if isinstance(model_args, ModelOptions):
37+
args = model_args.to_dict()
38+
else:
39+
args = dict(model_args or {})
40+
41+
if "season.duration" in args:
42+
if "season_duration" in args:
43+
msg = "Use either season.duration or season_duration, not both"
44+
raise ValueError(msg)
45+
args["season_duration"] = args.pop("season.duration")
46+
47+
return {**DEFAULT_MODEL_ARGS, **args}
48+
49+
3150
class CausalImpact:
3251
"""Causal inference using Bayesian structural time series.
3352
@@ -47,10 +66,7 @@ def __init__(
4766
model_args: dict | ModelOptions | None = None,
4867
alpha: float = 0.05,
4968
) -> None:
50-
if isinstance(model_args, ModelOptions):
51-
args = {**DEFAULT_MODEL_ARGS, **model_args.to_dict()}
52-
else:
53-
args = {**DEFAULT_MODEL_ARGS, **(model_args or {})}
69+
args = _normalize_model_args(model_args)
5470
standardize = args.pop("standardize_data")
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5672
self._prepared = DataProcessor.validate_and_prepare(
@@ -82,6 +98,8 @@ def _run_sampler(self, prepared: PreparedData, args: dict):
8298
seed=args["seed"],
8399
prior_level_sd=args["prior_level_sd"],
84100
expected_model_size=float(args["expected_model_size"]),
101+
nseasons=args["nseasons"],
102+
season_duration=args["season_duration"],
85103
)
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87105
def _compute_results(self, prepared: PreparedData, samples) -> CausalImpactResults:

python/causal_impact/options.py

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1919
standardize_data: bool = True
2020
prior_level_sd: float = 0.01
2121
expected_model_size: int = 1
22+
nseasons: int | None = None
23+
season_duration: int | None = None
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2325
def __post_init__(self) -> None:
2426
if self.niter < 1:
@@ -36,6 +38,26 @@ def __post_init__(self) -> None:
3638
if self.expected_model_size <= 0:
3739
msg = f"expected_model_size must be > 0, got {self.expected_model_size}"
3840
raise ValueError(msg)
41+
if self.nseasons is not None:
42+
if not isinstance(self.nseasons, int):
43+
msg = f"nseasons must be an integer, got {self.nseasons}"
44+
raise ValueError(msg)
45+
if self.nseasons < 1:
46+
msg = f"nseasons must be >= 1, got {self.nseasons}"
47+
raise ValueError(msg)
48+
if self.season_duration is None:
49+
object.__setattr__(self, "season_duration", 1)
50+
elif self.season_duration is not None:
51+
msg = "nseasons must be provided when season_duration is set"
52+
raise ValueError(msg)
53+
54+
if self.season_duration is not None:
55+
if not isinstance(self.season_duration, int):
56+
msg = f"season_duration must be an integer, got {self.season_duration}"
57+
raise ValueError(msg)
58+
if self.season_duration < 1:
59+
msg = f"season_duration must be >= 1, got {self.season_duration}"
60+
raise ValueError(msg)
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4062
def to_dict(self) -> dict:
4163
"""Convert to dict for backward compatibility with dict-based model_args."""

scripts/generate_r_reference.R

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@@ -35,6 +35,10 @@ scenarios <- list(
3535
no_effect = list(
3636
seed = 42, effect = 0.0, noise = 1.0, k = 0,
3737
n = 100, n_pre = 70
38+
),
39+
seasonal = list(
40+
seed = 7, effect = 3.0, noise = 0.3, k = 0,
41+
n = 112, n_pre = 84, nseasons = 7, season_duration = 1
3842
)
3943
)
4044

@@ -49,6 +53,13 @@ for (name in names(scenarios)) {
4953
# Data generation: y = 1.0 + effect*(t > n_pre) + N(0, noise^2) + covariates
5054
noise <- rnorm(n, 0, s$noise)
5155
y <- rep(1.0, n) + noise
56+
57+
if (!is.null(s$nseasons)) {
58+
season_levels <- ((1:s$nseasons) - mean(1:s$nseasons)) * 0.8
59+
seasonal_pattern <- rep(season_levels, each = s$season_duration)
60+
y <- y + rep(seasonal_pattern, length.out = n)
61+
}
62+
5263
y[(n_pre + 1):n] <- y[(n_pre + 1):n] + s$effect
5364

5465
x_data <- NULL
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7788
pre_period <- c(1, n_pre)
7889
post_period <- c(n_pre + 1, n)
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91+
model_args <- list(niter = 5000, prior.level.sd = 0.01)
92+
if (!is.null(s$nseasons)) {
93+
model_args$nseasons <- s$nseasons
94+
model_args$season.duration <- s$season_duration
95+
}
96+
8097
ci <- CausalImpact(
8198
df, pre_period, post_period,
82-
model.args = list(niter = 5000, prior.level.sd = 0.01)
99+
model.args = model_args
83100
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85102
# Extract summary statistics
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105122
true_effect = s$effect,
106123
noise_sd = s$noise,
107124
k = s$k,
125+
model_args = model_args[names(model_args) != "niter" & names(model_args) != "prior.level.sd"],
108126
data = list(
109127
y = as.numeric(y),
110128
x = x_data

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