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updated supplementary materials

Author: Ayoola Bimpe C

docs/CaseStudy.md

@@ -48,6 +48,14 @@ captures a large quantitative dataset with limited context, consider the
 - [ ]   reports the type of case study<sup>[1](#myfootnote1)</sup>
 - [ ]   describes data sources (e.g. participants' demographics and work roles)
 - [ ]   defines unit(s) of analysis or observation
+- [ ]	<supplement> coding scheme (required)
+- [ ]	<supplement> coding examples (required)
+- [ ]	<supplement> extended chain-of-evidence table(s) (required)
+
+
+
+
+
 
 <results>
 
@@ -60,16 +68,13 @@ captures a large quantitative dataset with limited context, consider the
 
 </checklist>
 
-### Supplementary Material
-<checklist name="Supplementary Materials">
-- [ ]	provides supplemental materials such as interview guide(s), coding schemes, coding examples, decision rules, or extended chain-of-evidence tables
-- [ ]   triangulates across data sources, informants or researchers
-</checklist>
-    
+
 ### Desirable Attributes
 <checklist name="Desirable">
 
 - [ ]	provides supplemental materials such as interview guide(s), coding schemes, coding examples, decision rules, or extended chain-of-evidence tables
+- [ ]	<supplement> interview guide(s) (optional)
+- [ ]	<supplement> decision rules (optional)
 - [ ]   triangulates across data sources, informants or researchers
 - [ ]   cross-checks interviewee statements (e.g. against direct observation or archival records)
 - [ ]   uses participant observation (ethnography) or direct observation (non-ethnography) and clearly integrates these observations into results<sup>[2](#myfootnote2)</sup>    

form_generator/js/read_standards.js

@@ -144,18 +144,21 @@ function generate_decision_message_block() {
 			} else if (justification_type2_checked_count > 0) {
 				msg = "GATEKEEP";
 				document.getElementById("deviation_reasonable").style.display = "block";
+				document.getElementById("Supplementary Materials").style.display = "block";
 				document.getElementById("Desirable").style.display = "block";
 				document.getElementById("Extraordinary").style.display = "block";
 
 			// if number of type 1 is greater than 0
 			} else if (justification_type1_checked_count > 0) {
 				msg = "ACCEPT";
 				document.getElementById("deviation_reasonable").style.display = "block";
+				document.getElementById("Supplementary Materials").style.display = "block";
 				document.getElementById("Desirable").style.display = "block";
 				document.getElementById("Extraordinary").style.display = "block";
 
 			} else {
 				msg = "ACCEPT";
+				document.getElementById("Supplementary Materials").style.display = "block";
 				document.getElementById("Desirable").style.display = "block";
 				document.getElementById("Extraordinary").style.display = "block";
 
@@ -679,8 +682,9 @@ function generate_two_phase_reviewer_deviation_block(checklistItem_id) {
 	return deviation_block;
 }
 
+
 // convert from Markdown to HTML checklists
-function convert_MD_standard_checklists_to_html_standard_checklists(standardName, checklistName, checklistText, footnotes){
+function convert_MD_standard_checklists_to_html_standard_checklists(standardName, checklistName, checklistText, footnotes,supCheckList){
 
 	// ???????
 	tester = getParameterByName('y')[0] == 'noval' ? true : false;
@@ -735,13 +739,19 @@ function convert_MD_standard_checklists_to_html_standard_checklists(standardName
 			// !!!!!!!!!!!!!!!! we dont need this part in the checklist
 			if(line_text.includes("complies with all applicable empirical standards"))
 				continue;
-			
+
 			// if line_text includes a specific regex set to true ( line break with horizontal rule)
 			IMRaD_line_break = line_text.includes('<br\/>_hr_') ? true : false;
 
 			// Replace line break and horizontal rule with empty string
 			line_text = line_text.replace(/(<br\/>_hr_)+/g, '');
 
+			//comment later
+			if(line_text.includes("{supplement}") && checklistName !== "Supplementary")  {
+				supCheckList.items += "- [ ]" + line_text;
+				continue;
+			}
+
 			// Change the text to the string held in line_text
 			checklistItemLI.setAttribute("text", line_text);
 
@@ -816,6 +826,7 @@ function convert_MD_standard_checklists_to_html_standard_checklists(standardName
 			checklists.appendChild(checklistItemLI);
 		}
 	}
+
 	return checklists;
 }
 
@@ -902,10 +913,10 @@ function create_role_heading(){
 }	
 
 // Prepare unordered lists
-function preparation_to_convert_MD_to_HTML(standardTagName, checklistTagName, checklistInnerHTML, footnotes){
+function preparation_to_convert_MD_to_HTML(standardTagName, checklistTagName, checklistInnerHTML, footnotes,supCheckList){
 
 	// superscript tags
-	checklistInnerHTML = checklistInnerHTML.replaceAll("<sup>", "{sup}").replaceAll("</sup>", "{/sup}");
+	checklistInnerHTML = checklistInnerHTML.replaceAll("<sup>", "{sup}").replaceAll("</sup>", "{/sup}").replaceAll("<supplement>", "{supplement}");
 
     var tempDivElement = document.createElement("div");
     tempDivElement.innerHTML = checklistInnerHTML;
@@ -922,8 +933,9 @@ function preparation_to_convert_MD_to_HTML(standardTagName, checklistTagName, ch
 	// Supplement Files - Change from docs to link, change from .md file to nothing
 	checklistText = checklistText.replaceAll('https://github.com/acmsigsoft/EmpiricalStandards/blob/master/Supplements/', '../Supplements?supplement=').replaceAll('.md', '');
 
+
 	// Convert Markdown Checklists to HTML checklists
-	checklists = convert_MD_standard_checklists_to_html_standard_checklists(standardTagName, checklistTagName, checklistText, footnotes)
+	checklists = convert_MD_standard_checklists_to_html_standard_checklists(standardTagName, checklistTagName, checklistText, footnotes,supCheckList)
 
 	return checklists;
 }
@@ -986,6 +998,8 @@ function create_requirements_checklist(){
 	form.id = "checklists";
 	form.name = "checklists";
 
+	var supCheckList = {items:""};
+
 	// create Header for Essential Requirements with an unordered list
 	var EssentialUL = create_requirements_heading_with_UL("Essential");
 
@@ -1001,13 +1015,13 @@ function create_requirements_checklist(){
 	// hide desirable and extraordinary list of requirements for One Phase Reviewer
 	if(role == "\"one-phase-reviewer\""){
 		DesirableUL.style = "padding: 0px; display:none;";
-		SupplementaryUL.style = "padding: 0px; display:none;";
+		SupplementaryUL.style = "padding: 0px; display:block;";
 		ExtraordinaryUL.style = "padding: 0px; display:none;";
 	}
 	// hide desirable and extraordinary list of requirements for Two Phase Reviewer
 	else if(role == "\"two-phase-reviewer\""){
 		DesirableUL.style = "padding: 0px; display:none;";
-		SupplementaryUL.style = "padding: 0px; display:none;";
+		SupplementaryUL.style = "padding: 0px; display:block;";
 		ExtraordinaryUL.style = "padding: 0px; display:none;";
 	}
 
@@ -1065,18 +1079,20 @@ function create_requirements_checklist(){
 					EssentialUL.appendChild(Yes_No);
 				//EssentialUL.appendChild(checklists);
 			}
+
 			else if (checklistTag.getAttribute('name') == "Desirable") {
 				//DesirableUL.appendChild(standard_header_rule);
 
 				// Change from Markdown to HTML elements
-				checklists = preparation_to_convert_MD_to_HTML(standardTag.getAttribute('name'), checklistTag.getAttribute('name'), checklistHTML, footnotes);
+				checklists = preparation_to_convert_MD_to_HTML(standardTag.getAttribute('name'), checklistTag.getAttribute('name'), checklistHTML, footnotes,supCheckList);
 				DesirableUL.appendChild(checklists);
 			}
+
 			else if (checklistTag.getAttribute('name') == "Extraordinary") {
 				//ExtraordinaryUL.appendChild(standard_header_rule);
 
 				// Change from Markdown to HTML elements
-				checklists = preparation_to_convert_MD_to_HTML(standardTag.getAttribute('name'), checklistTag.getAttribute('name'), checklistHTML, footnotes);
+				checklists = preparation_to_convert_MD_to_HTML(standardTag.getAttribute('name'), checklistTag.getAttribute('name'), checklistHTML, footnotes,supCheckList);
 				ExtraordinaryUL.appendChild(checklists);
 			}
 		}
@@ -1089,15 +1105,22 @@ function create_requirements_checklist(){
 	notify_testers();
 
 	// Change from Markdown to HTML elements
-	checklists = preparation_to_convert_MD_to_HTML("", 'Essential', all_essential_IMRaD_items_innerHTML, footnotes);
+	checklists = preparation_to_convert_MD_to_HTML("", 'Essential', all_essential_IMRaD_items_innerHTML, footnotes,supCheckList);
 	EssentialUL.appendChild(checklists);
-	
+
+	checklists = preparation_to_convert_MD_to_HTML(standardTag.getAttribute('name'), "Supplementary", supCheckList.items.replaceAll("{supplement}", ""), footnotes,supCheckList);
+	SupplementaryUL.appendChild(checklists);
+
+
 	// Add Essential Attributes to the form
 	form.appendChild(EssentialUL);
 
 	// Create download button
 	var download = create_download_button();
 
+	//append supplementary material list
+	form.appendChild(SupplementaryUL);
+
 	// (All 'Yes' -> accept manuscript)
 	var decision_msg = generate_message("decision_msg", "red", (role != "\"author\"" ? "The manuscript meets all essential criteria: ACCEPT." : ""), 2, 0);
 	form.appendChild(decision_msg);
@@ -1131,6 +1154,7 @@ function create_requirements_checklist(){
 	}
 
 	// Add Desirable and Extraordinary Unordered List to Form
+
 	form.appendChild(DesirableUL);
 	form.appendChild(ExtraordinaryUL);
 

tab_03_standards.md

@@ -105,7 +105,7 @@ function openStandardFromURL(evt) {
 <div id="CaseStudy" class="tabcontent">
   <p>
     {% capture std %}{% include_relative docs/CaseStudy.md %}{% endcapture %}
-    {{ std | remove: '<standard name="Case Study and Ethnography">' | remove: '<checklist name="Essential">' | remove: '<checklist name="Desirable">' | remove: '<checklist name="Extraordinary">' | remove: '</checklist>' | remove: '</standard>' | remove: '<footnote>' | remove: '</footnote>' | remove: '<intro>' | remove: '<method>' | remove: '<results>' | remove: '<discussion>' | remove: '<other>' | replace: '- [ ]', '-' | replace: 'https://github.com/acmsigsoft/EmpiricalStandards/blob/master/docs/', '../docs?standard=' | replace: 'https://github.com/acmsigsoft/EmpiricalStandards/blob/master/Supplements/', '../Supplements?supplement=' | replace: '.md', '' | markdownify }}
+    {{ std | remove: '<standard name="Case Study and Ethnography">' | remove: '<checklist name="Essential">' | remove: '<checklist name="Desirable">' | remove: '<checklist name="Extraordinary">' | remove: '</checklist>' | remove: '</standard>' | remove: '<footnote>' | remove: '</footnote>' | remove: '<intro>' | remove: '<method>' | remove: '<results>' | remove: '<discussion>' | remove: '<other>' | remove: '<desc>' | remove: '</desc>' | remove: '<supplement>' | replace: '- [ ]', '-' | replace: 'https://github.com/acmsigsoft/EmpiricalStandards/blob/master/docs/', '../docs?standard=' | replace: 'https://github.com/acmsigsoft/EmpiricalStandards/blob/master/Supplements/', '../Supplements?supplement=' | replace: '.md', '' | markdownify }}
   </p>
 </div>