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‎README.md

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latest advances, offer efficient implementations using numba, and interfaces with other
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time series packages to provide a single framework for algorithm comparison.
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The latest `aeon` release is `v0.8.0`. You can view the full changelog
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The latest `aeon` release is `v0.8.1`. You can view the full changelog
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[here](https://www.aeon-toolkit.org/en/stable/changelog.html).
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Our webpage and documentation is available at https://aeon-toolkit.org.
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The following modules are still considered experimental, and the [deprecation policy](https://www.aeon-toolkit.org/en/stable/developer_guide/deprecation.html)
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does not apply:
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`annotation`, `anomaly_detection`, `benchmarking`, `segmentation`, `similarity_search`,
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`testing`, `transformations/series`, `visualisation`
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| Overview | |
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|---------------|-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
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| **CI/CD** | [![github-actions-release](https://img.shields.io/github/actions/workflow/status/aeon-toolkit/aeon/release.yml?logo=github&label=build%20%28release%29)](https://github.com/aeon-toolkit/aeon/actions/workflows/release.yml) [![github-actions-main](https://img.shields.io/github/actions/workflow/status/aeon-toolkit/aeon/pr_pytest.yml?logo=github&branch=main&label=build%20%28main%29)](https://github.com/aeon-toolkit/aeon/actions/workflows/pr_pytest.yml) [![github-actions-nightly](https://img.shields.io/github/actions/workflow/status/aeon-toolkit/aeon/periodic_tests.yml?logo=github&label=build%20%28nightly%29)](https://github.com/aeon-toolkit/aeon/actions/workflows/periodic_tests.yml) [![docs-main](https://img.shields.io/readthedocs/aeon-toolkit/stable?logo=readthedocs&label=docs%20%28stable%29)](https://www.aeon-toolkit.org/en/stable/) [![docs-main](https://img.shields.io/readthedocs/aeon-toolkit/latest?logo=readthedocs&label=docs%20%28latest%29)](https://www.aeon-toolkit.org/en/latest/) [![!codecov](https://img.shields.io/codecov/c/github/aeon-toolkit/aeon?label=codecov&logo=codecov)](https://codecov.io/gh/aeon-toolkit/aeon) |

‎aeon/__init__.py

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"""aeon toolkit."""
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__version__ = "0.8.0"
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__version__ = "0.8.1"
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__all__ = ["show_versions"]
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‎docs/changelogs/v0.8.md

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# v0.8.1
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April 2024
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The following modules are still considered experimental, and the deprecation policy does
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not apply:
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`annotation`, `anomaly_detection`, `benchmarking`, `segmentation`, `similarity_search`,
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`testing`, `transformations/series`, `visualisation`
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## Highlights
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- Mostly bug fixes, documentation improvements and new deprecations
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- Subgradient barycentre averaging is available for clustering ({user}`chrisholder`)
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## Anomaly Detection
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### Enhancements
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- [ENH] `BaseSeriesEstimator` rework ({pr}`1394`) {user}`MatthewMiddlehurst`
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## Classification
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### Documentation
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- [DOC] Correct `WeightedEnsembleClassifier` parameter docstring ({pr}`1418`) {user}`wayneadams`
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### Enhancements
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- [ENH] `fit_predict` for FreshPRINCE and RotationForest ({pr}`1456`) {user}`MatthewMiddlehurst`
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### Other
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- [BUG] Fix RDST doctest failure & numba deprecration warning ({pr}`1445`) {user}`baraline`
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## Clustering
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### Enhancements
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- [ENH] Subgradient barycentre averaging ({pr}`1339`) {user}`chrisholder`
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- [ENH] Kmeans allow empty clusters ({pr}`1400`) {user}`chrisholder`
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### Maintenance
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- [MNT] split up and simplified ba test ({pr}`1432`) {user}`chrisholder`
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## Datasets
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### Bug Fixes
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- [BUG] fix loader ({pr}`1428`) {user}`TonyBagnall`
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### Documentation
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- [DOC] PR #1452 ({pr}`1462`) {user}`RishavKumarSinha`
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## Distances
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### Enhancements
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- [ENH] Subgradient barycentre averaging ({pr}`1339`) {user}`chrisholder`
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- [ENH] Distance module pairwise unequal length support ({pr}`1356`) {user}`chrisholder`
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## Forecasting
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### Deprecation
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- [ENH] replace convert/convert_to with convert_series ({pr}`1338`) {user}`TonyBagnall`
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- [DEP] deprecate check_scorer ({pr}`1439`) {user}`TonyBagnall`
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- [DEP] deprecate probabilistic performance metric classes ({pr}`1436`) {user}`TonyBagnall`
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### Enhancements
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- [ENH] replace convert/convert_to with convert_series ({pr}`1338`) {user}`TonyBagnall`
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- [ENH] remove conversion in get_cutoff ({pr}`1342`) {user}`TonyBagnall`
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- [ENH] remove convert_to and vectorized import from index_functions ({pr}`1433`) {user}`TonyBagnall`
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### Other
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- [COV] Tests for testing/utils/data_gen ({pr}`1347`) {user}`TonyBagnall`
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## Regression
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### Enhancements
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- [ENH] `fit_predict` for FreshPRINCE and RotationForest ({pr}`1456`) {user}`MatthewMiddlehurst`
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## Segmentation
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### Enhancements
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- [ENH] `BaseSeriesEstimator` rework ({pr}`1394`) {user}`MatthewMiddlehurst`
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## Similarity Search
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### Enhancements
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- [ENH] `BaseSeriesEstimator` rework ({pr}`1394`) {user}`MatthewMiddlehurst`
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## Transformations
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### Bug Fixes
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- [BUG] Fix MultiRocketMultivariate failures ({pr}`1453`) {user}`baraline`
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### Deprecation
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- [DEP] deprecate check_scorer ({pr}`1439`) {user}`TonyBagnall`
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### Documentation
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- [DOC] PR #1452 ({pr}`1462`) {user}`RishavKumarSinha`
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### Enhancements
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- [ENH] BaseSeriesTransformer maintains axis for user determined output with BaseSeriesEstimator function ({pr}`1372`) {user}`TonyBagnall`
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- [ENH,REF] Refactor `univariate-only` tag ({pr}`1363`) {user}`itsdivya1309`
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- [ENH] `BaseSeriesEstimator` rework ({pr}`1394`) {user}`MatthewMiddlehurst`
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- [ENH] remove datatypes call from transformations test function ({pr}`1434`) {user}`TonyBagnall`
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- [ENH] Add support for array-like and statistical inputs as arguments in fill_value of Padding Transformer ({pr}`1373`) {user}`aadya940`
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- [ENH] Autocorrelation SeriesTransformer ({pr}`1380`) {user}`TonyBagnall`
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### Refactored
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- [ENH,REF] Refactor `univariate-only` tag ({pr}`1363`) {user}`itsdivya1309`
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### Other
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- [BUG] Fix RDST doctest failure & numba deprecration warning ({pr}`1445`) {user}`baraline`
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## Unit Testing
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### Maintenance
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- [MNT] Add Classifiers For Result Comparison ({pr}`1379`) {user}`harshithasudhakar`
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### Other
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- [COV] Tests for testing/utils/data_gen ({pr}`1347`) {user}`TonyBagnall`
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## Other
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### Bug Fixes
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- [BUG] allow np.ndarray with ndim>1 to convert to pd.series when squeezable to 1D ({pr}`1427`) {user}`TonyBagnall`
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### Deprecation
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- [DEP] Make `VectorizedDF` private ({pr}`1369`) {user}`MatthewMiddlehurst`
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### Documentation
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- [DOCS] Update the mentoring projects ({pr}`1366`) {user}`TonyBagnall`
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- [DOC] Fixes mis-wording/typo in mentoring docs ({pr}`1396`) {user}`wayneadams`
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- [DOC] Adds previously implemented classifiers to docs/api_references ({pr}`1401`) {user}`wayneadams`
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- [DOC] About Us webpage update ({pr}`1419`) {user}`MatthewMiddlehurst`
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- [DOC] Add estimator overview table with capabilities ({pr}`1426`) {user}`baraline`
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- [DOC] Remove optional from docstrings ({pr}`1458`) {user}`griegner`
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### Enhancements
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- [DEP] Deprecate _serialize file and load function ({pr}`1378`) {user}`TonyBagnall`
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- [ENH] remove datatypes call from test_interval_wrappers ({pr}`1435`) {user}`TonyBagnall`
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### Maintenance
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- [MNT] Notebook test exclusion tag and stale branch removal ({pr}`1316`) {user}`MatthewMiddlehurst`
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- [MNT] Update branch clean action ({pr}`1422`) {user}`MatthewMiddlehurst`
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- [MNT] `dask` CI fix, ReadTheDocs fix and expanded full pytest actions tag ({pr}`1420`) {user}`MatthewMiddlehurst`
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- [MNT] Update cache restore action ({pr}`1431`) {user}`aadya940`
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### Refactored
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- [REF] Move tag deprecation to registry ({pr}`1460`) {user}`MatthewMiddlehurst`
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## Contributors
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The following have contributed to this release through a collective 38 GitHub Pull Requests:
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{user}`aadya940`,
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{user}`baraline`,
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{user}`chrisholder`,
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{user}`griegner`,
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{user}`harshithasudhakar`,
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{user}`itsdivya1309`,
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{user}`MatthewMiddlehurst`,
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{user}`RishavKumarSinha`,
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{user}`TonyBagnall`,
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{user}`wayneadams`
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# v0.8.0
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‎pyproject.toml

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[project]
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name = "aeon"
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version = "0.8.0"
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version = "0.8.1"
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description = "A toolkit for conducting machine learning tasks with time series data"
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authors = [
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{name = "aeon developers", email = "[email protected]"},
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[project.optional-dependencies]
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all_extras = [
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"cloudpickle",
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"dask[dataframe]<2024.3.0; python_version < '3.11'",
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"esig>=0.9.7,<0.9.8.3; python_version < '3.11'",
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"filterpy>=1.4.5",
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"gluonts>=0.12.4",
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"tbats>=1.1.0",
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"tensorflow>=2.12; python_version < '3.12' and python_version >= '3.9'",
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"tensorflow-addons; python_version < '3.12'",
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"tensorflow-addons; python_version < '3.12' and python_version >= '3.9'",
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"torch>=1.13.1",
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"tsfresh>=0.20.0",
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"tslearn>=0.5.2",
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"xarray",
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# for some reason, a heirarchical dask test fails on some Python versions with the
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# later versions of pyarrow
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# later versions of pyarrow and dask
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"dask[dataframe]<2024.3.0; python_version < '3.11'",
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"pyarrow<12; python_version < '3.12'",
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"pyarrow-hotfix; python_version < '3.12'",
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]
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dl = [
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"tensorflow>=2.12; python_version < '3.12' and python_version >= '3.9'",
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"tensorflow-addons; python_version < '3.12'",
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"tensorflow-addons; python_version < '3.12' and python_version >= '3.9'",
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]
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unstable_extras = [
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"mrsqm>=0.0.1,<0.1.0 ; platform_system == 'Darwin'", # requires gcc and fftw to be installed for Windows and some other OS (see http://www.fftw.org/index.html)
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"mrsqm>=0.0.1,<0.1.0 ; platform_system == 'Darwin' and python_version < '3.12'", # requires gcc and fftw to be installed for Windows and some other OS (see http://www.fftw.org/index.html)
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"pycatch22<=0.4.3", # known to fail installation on some setups
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"pyfftw>=0.12.0; python_version < '3.12'", # requires fftw to be installed for Windows and some other OS (see http://www.fftw.org/index.html)
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dev = [
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--durations 20
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--timeout 600
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--showlocals
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--numprocesses auto
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--numprocesses logical
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--dist worksteal
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--reruns 2
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--only-rerun "crashed while running"

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